brainreg /path/to/data /path/to/output -x 3.6498 -y 3.6498 -z 15.3767 --orientation lsp --atlas allen_mouse_25um
Hi!
I am having a problem with registering a brain for a current project. Right before the Debug process starts to run I receive this error:
Traceback (most recent call last):
File "c:\users\administrator\miniconda3\envs\cellfinder\lib\concurrent\futures\process.py", line 239, in _process_worker
r = call_item.fn(call_item.args, *call_item.kwargs)
File "c:\users\administrator\miniconda3\envs\cellfinder\lib\site-packages\brainio\brainio.py", line 465, in load_from_paths_sequence
return volume
UnboundLocalError: local variable 'volume' referenced before assignment
This error only occurs with this one brain. All other brains I register succeed. Thank you for your help!
brainglobe
and the tool you're asking about, e.g. cellfinder
. This Gitter channel will no longer be monitored. Thanks!