dingo@TolisChal and @hariszaf did some great and hard work building that
python package that can be use to analyse metabolic networks.Even this is related to systems biology / bioinformatics topics we would like to as for the help of our community to try this package which is available here: https://github.com/GeomScale/dingo
There are also some good first issues here https://github.com/GeomScale/dingo/issues if feel like contributing to a new, fresh open source project.
We have labeled a few issues in our two main repositories: volesti and dingo
We are looking forward to your contributions. Also, if you have any ideas about new issues that could be suitable for this event (i.e. self-contained and simple for new comers) please let us know!
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Documentation of the code is not written yet, unfortunately.
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Thanks for your interest in our project. Please star our two main
repositories (if you find them useful)
https://github.com/GeomScale/volesti
and
https://github.com/GeomScale/dingo
Both repos have a contributions guide e.g.
https://github.com/GeomScale/volesti/blob/develop/CONTRIBUTING.md
Please also read https://opensource.guide/how-to-contribute/
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I have a little knowledge of Data Science and Machine learning using python and I am good in Data Structure & Algorithms.
Could you please guide me on which project is suitable for me to start with?
Hello and thanks for your interest in our project. Our two main repositories are https://github.com/GeomScale/volesti and https://github.com/GeomScale/dingo (please do not forget to star them if you find them useful ;)
Both repos have a contributions guide e.g. https://github.com/GeomScale/volesti/blob/develop/CONTRIBUTING.md
Please also read general guide here: https://opensource.guide/how-to-contribute/
A common way of getting started is to checkout the list of issues with the label "good first issue" e.g. for volesti:
https://github.com/GeomScale/volesti/issues?q=is%3Aissue+is%3Aopen+label%3A%22good+first+issue%22
Hello @jayb28 @thegeekymuggle_twitter and thanks for your interest in our project. Our two main repositories are https://github.com/GeomScale/volesti and https://github.com/GeomScale/dingo Both repos have a contributions guide e.g. https://github.com/GeomScale/volesti/blob/develop/CONTRIBUTING.md
Please also read general guide here: https://opensource.guide/how-to-contribute/
A common way of getting started is to checkout the list of issues with the label "good first issue" e.g. for volesti:
https://github.com/GeomScale/volesti/issues?q=is%3Aissue+is%3Aopen+label%3A%22good+first+issue%22
examples/vpolytope-volume. I think there is a typing error in CMakelist on line no. 109 and 110, it should be vpolytopevolume.cpp not vpolytopeVolume.cpp.
I looked into GeomScale/volesti#193 issue and while reproducing it on my system, I got an error in cmake of
examples/vpolytope-volume(Attached image below). I think there is a typing error in CMakelist on line no. 109 and 110, it should be vpolytopevolume.cpp not vpolytopeVolume.cpp , because after replacing it the error was resolved or have I misinterpreted something?
cmake -DLP_SOLVE='path/to/dir' .. <- two tiny dots represent where is CMakeLists.txt. For more info: https://github.com/GeomScale/volesti/blob/develop/doc/cpp_interface.md
The mathematical background behind volesti is described in research papers here: https://geomscale.github.io/publications/ (the talks could be more accessible to start with https://geomscale.github.io/talks )
Hello, Pratham Shah here, an undergrad at VJTI, Mumbai. I would like to contribute to volesti.
I looked into GeomScale/volesti#193 issue and while reproducing it on my system, I got an error in cmake ofexamples/vpolytope-volume(Attached image below). I think there is a typing error in CMakelist on line no. 109 and 110, it should bevpolytopevolume.cppnotvpolytopeVolume.cpp, because after replacing it the error was resolved or have I misinterpreted something?
I'm still uncertain of thiss. Could someone please confirm
📢 Announcement Discussions for volesti are now available on github!
https://github.com/GeomScale/volesti/discussions
We’re using Discussions as a place to connect with other members of our community. We hope that you:
- Ask questions you’re wondering about.
- Share ideas.
- Engage with other community members.
- Welcome others and are open-minded. Remember that this is a community we build together 💪
GeomScale organization has been accepted as a mentoring organization for the 2022 Google Summer of Code 🎉.
We propose several topics for software development internships with a strong algorithmic and mathematical flavor.
We are searching for contributors with strong programming skills in C++ and/or Python/R and solid background in at least one of the following topics: (randomized) algorithms, computational geometry, statistics, optimization. Stipends are paid by Google and interns can work from anywhere in the world.
NEW this year There are two types of projects: part time (~175 hours) or full time (~350 hours). Moreover, everybody can apply, no need to be enrolled as a student.
If interested check out our project page and get in touch with mentors now!
Thanks and your support will be highly appreciated.
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Hi everyone, I am Huu Phuoc Le at Sorbonne University and I would like to work on Sampling correlation matrices project. I did the tests 1 and 2 and want to ask some questions on Test 3: Use the generator (of LMI of the spectrahedron of correlation matrices) from Test 2 and the existing C++ spectrahedron class in volesti to sample uniformly distributed correlation matrices with Billiard Walk.
After creating the required spectrahedron, I launch RandomPointGenerator::apply through
Generator::apply(spectra, q, num_points, walk_len, randPoints, push_back_policy, rng);
and got an error 'no matching function for call to Spectrahedron<>::line_positive_intersect(Point, Point, VT, VT, NT)'. Looking through the source code, I found that BilliardWalk was written for polytopes but the function line_positive_intersect(Point, Point, VT, VT, NT) does not exist for Spectrahedron class. I would like to ask if the BilliardWalk for Spectrahedron exists already in volesti or the test asks to implemenent this functionality.
Looking forward to your answer.
Please submit before 19 April otherwise your application will not be considered (details on gsoc website https://summerofcode.withgoogle.com/programs/2022).
Also please share the proposal drafts with your mentors to get some feedback ASAP.
(from someone[1] who is interested in the project[2] and GSoD work)
*from Statement of interest
[1] https://github.com/tapaswenipathak/tapaswenipathak.github.io/blob/master/Resume.pdf
[2] https://geomscale.github.io/GSoD-application/
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(I did not find any information about this on the info page[2].)
hi @vissarion: please find a draft of ideas, and structure: https://paper.dropbox.com/doc/Statement-of-Interest-GeomScale-GSoD22--BhRvHjQg2QUMF~Bmx9GWP3bZAQ-tYeDGCm4z98PoS2A9A5WZ
I would love to have it as a discussion starter for strategizing documentation updates.
(let me know if you prefer GoogleDoc, paper.dropbox.com just have better ui/ux, but requires signup)
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