These are chat archives for KHP-Informatics/bioindocker15

16th
Nov 2015
Stephen J Newhouse
@snewhouse
Nov 16 2015 10:05
@pditommaso got any tips before I start deving up a nextflow pipeline for some of our NGS work? am about to start trawling through all of your .nf files on git. fun and games ahead :smile:
Paolo Di Tommaso
@pditommaso
Nov 16 2015 10:07
Hi
Stephen J Newhouse
@snewhouse
Nov 16 2015 10:10
@pditommaso hello
Paolo Di Tommaso
@pditommaso
Nov 16 2015 10:12
and do not use absolute paths in your process scripts
yes, try to think process as self-conatined tasks
yes, try to think process as self-contained tasks
(I'm at the dockercon and there's a very bad connection ..)
Stephen J Newhouse
@snewhouse
Nov 16 2015 10:15
@pditommaso no worries..thanks for the tips. Conference centers need to sort their wifi out ;)
Paolo Di Tommaso
@pditommaso
Nov 16 2015 10:16
well, to many people using the wi-fi!
anyway for any other doubts do not hesitate to message me
Stephen J Newhouse
@snewhouse
Nov 16 2015 10:17
Cheers. Will do!