Where communities thrive


  • Join over 1.5M+ people
  • Join over 100K+ communities
  • Free without limits
  • Create your own community
People
Repo info
Activity
  • Feb 10 16:55
    wasade commented #855
  • Feb 10 16:31
    guillaume-gricourt commented #855
  • Feb 10 16:19
    wasade commented #855
  • Feb 10 12:07
    guillaume-gricourt edited #855
  • Feb 10 12:04
    guillaume-gricourt opened #855
  • Jan 26 20:25
    MaryoHg commented #852
  • Jan 11 19:18
    wasade commented #854
  • Jan 11 14:59
    antgonza opened #854
  • Dec 02 2020 21:24

    wasade on master

    Maybe the builds work now? (compare)

  • Dec 02 2020 21:18

    wasade on master

    activate for running too (compare)

  • Dec 02 2020 21:14

    wasade on master

    docs to 3.7 (compare)

  • Dec 02 2020 21:11

    wasade on master

    bash (compare)

  • Dec 02 2020 21:06

    wasade on master

    kick (compare)

  • Dec 02 2020 21:02

    wasade on master

    try incubator (compare)

  • Dec 02 2020 20:48

    wasade on master

    using a different python (compare)

  • Dec 02 2020 20:22

    wasade on master

    asd (compare)

  • Dec 02 2020 20:20

    wasade on master

    not sure whats going on (compare)

  • Dec 02 2020 20:05

    wasade on master

    conda activate? (compare)

  • Dec 02 2020 19:52

    wasade on master

    env update to install (compare)

  • Dec 02 2020 19:47

    wasade on master

    Update not upgrade (compare)

Daniel McDonald
@wasade
did you do it prior to an activate?
or following?
Greg Caporaso
@gregcaporaso
no, it’s working, but i don’t understand how
Daniel McDonald
@wasade
i mean in your ~/.bash_profile or something
Greg Caporaso
@gregcaporaso
i put the line in bashrc, log out, log back in, activate my env, and tab completion works
Daniel McDonald
@wasade
very odd
Greg Caporaso
@gregcaporaso
and biom is not available outside of my env
i guess click is just magic?
Daniel McDonald
@wasade
I get: "-bash: biom: command not found"
if i do it outside of an env
can you open a new terminal, not activate an environment, and send the output from which biom?
Greg Caporaso
@gregcaporaso
no output
Daniel McDonald
@wasade
that’s total voodoo unless it caches somewhere, but that doesn’t appear to be the case from testing
weird
thanks
Greg Caporaso
@gregcaporaso
sounds like that’s what it’s doing, from the description at the link i sent
Daniel McDonald
@wasade
the command source foo calls foo as though it were a program
click intercepts the call with a hook
then generates the necessary COMP_WORDS blah blah
it cannot work if foo is not in the path
but if its working for you, then awesome :)
Greg Caporaso
@gregcaporaso
source biom is used to create the shell script in the env
Daniel McDonald
@wasade
the click codebase is elegant btw… it’s worth a traversal if you haven’t had a chance to read through any of it
Greg Caporaso
@gregcaporaso
you then run the shell script from outside the env
i have looked through parts, it’s really nice
Daniel McDonald
@wasade
ohhh, i see now
heh
bam, okay, got it working
had my blinders on and only saw the “Activation” section, not the “Activation script"
Daniel McDonald
@wasade
btw
we can make in rain rainbows
Jai Ram Rideout
@jairideout
interesting, thanks @gregcaporaso for finding that alternative way to generate the autocomplete script! and very cool re: ansi colors :)