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  • Jan 04 17:03
    antgonza milestoned #3171
  • Jan 04 17:03
    antgonza opened #3171
  • Dec 31 2021 14:36
    nick-youngblut opened #3170
  • Dec 22 2021 01:08

    charles-cowart on dev

    Fix qsub hanging error It appe… Fix pip to version 18.1 Fix pip=18.1 to pip==18.1 and 7 more (compare)

  • Dec 13 2021 16:59

    charles-cowart on dev

    "3.8", "3.9", "3.10" actually using the matrix.pytho… rm pip limit and 19 more (compare)

  • Dec 13 2021 16:59
    charles-cowart closed #3169
  • Dec 11 2021 15:31
    antgonza review_requested #3169
  • Dec 11 2021 14:57
    coveralls commented #3169
  • Dec 11 2021 14:36
    antgonza synchronize #3169
  • Dec 11 2021 14:07
    antgonza synchronize #3169
  • Dec 10 2021 22:33
    antgonza synchronize #3169
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    antgonza synchronize #3169
  • Dec 10 2021 22:18
    antgonza synchronize #3169
  • Dec 10 2021 20:07
    antgonza edited #3169
  • Dec 10 2021 20:05
    antgonza synchronize #3169
  • Dec 10 2021 19:58
    antgonza synchronize #3169
  • Dec 10 2021 19:54
    coveralls commented #3169
  • Dec 10 2021 19:32
    antgonza synchronize #3169
  • Dec 10 2021 18:28
    antgonza synchronize #3169
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    antgonza synchronize #3169
Jose Navas
@josenavas
@ElDeveloper do you remember why we force to use docker? we where having a problem and we had to move to them
it was something related with using too much memory or something like that right?
Joshua Shorenstein
@squirrelo
I believe it was their system overloading so things would timeout since not enough CPU or memory.
Yoshiki Vázquez Baeza
@ElDeveloper
@josenavas, right, moving to docker made it such that builds would no longer fail due to an excess in memory consumption
and it sucks because we are essentially juggling with pieces back and forth
Jose Navas
@josenavas
yeah… grrrr
Yoshiki Vázquez Baeza
@ElDeveloper
:goat: oh well, at least this is going to let us move forward for the time being
what I am kinda worried about is that pip installing qiime will hang for "some" users who have "whatever" specs on their systems, because files cannot be downloaded from the FTP ste
GOD * DAMNIT!!! there's a failure
I think we are running out of memory
Joshua Shorenstein
@squirrelo
what the hell is using so much memory?
Jose Navas
@josenavas
note that those images also do not have a lot of memory...
Yoshiki Vázquez Baeza
@ElDeveloper
ok, the failures were not memory related
were timeouts
Jose Navas
@josenavas
they’re timeouts
Yoshiki Vázquez Baeza
@ElDeveloper
does anyone want to merge as is?
Jose Navas
@josenavas
which is easier to hit on this images because yoou only have 1 CPU with up to 2 if there is enough free resources
Yoshiki Vázquez Baeza
@ElDeveloper
can you repeat that?
oh ok ok
yeah
Jose Navas
@josenavas
haha ok
Yoshiki Vázquez Baeza
@ElDeveloper
if someone restarted the build, note that it already has a failure
and it's a different one ...
:rage:
Daniel McDonald
@wasade
loosing my mind.
no idea how to actually recreate this issue
@ElDeveloper, is it possible to deploy the travis docker image or whatever was being used locally and see if this manifests?
ahhhhhh, headway
wget works from pando login nodes
sorry
compute nodes
not login nodes
the common config (i think) between the docker image, and the login nodes is likely either NAT or round robin DNS
Daniel McDonald
@wasade
once the server enters pasv, the routing on either pando or docker are getting confused
Jose Navas
@josenavas
hey
I just found this and looks related:
travis-ci/travis-ci#3012
Daniel McDonald
@wasade
and not fwd'ing the data to the right client-side port. i think. tcpdumps don't fully support this as it appears comm is 2-way on the pasv port
that is interesting, thanks
issue there is http
might be related if it is a NAT issue
but i don't think http does the insane port juggling that ftp does
Yoshiki Vázquez Baeza
@ElDeveloper
@wasade, I don't think the docker image is public
Daniel McDonald
@wasade
note also the curl cmd that doesn't work in that issue appears to work on pando
Yoshiki Vázquez Baeza
@ElDeveloper
if someone finds the ID, I'll deploy it in my system and report back
hahah
damn
Jose Navas
@josenavas
re @squirrelo about what is using a lot of memory: in those instances, travis deploys the postgres database in memory, in order to speed-up access… however it might be consuming most of the memory
that doesn’t happen on the docker images
Yoshiki Vázquez Baeza
@ElDeveloper
more failures due to timeouts