Where communities thrive


  • Join over 1.5M+ people
  • Join over 100K+ communities
  • Free without limits
  • Create your own community
People
Activity
    Stian Soiland-Reyes
    @stain
    Welcome to this chat room! See also http://ask.bioexcel.eu/c/workflows-ig
    Stian Soiland-Reyes
    @stain
    Hello! :)
    Michael R. Crusoe
    @mr-c
    Hoopla
    danidi
    @danidi
    Hi
    Stian Soiland-Reyes
    @stain

    Any LSF users?

    https://developer.ibm.com/storage/2017/05/04/cwl-workflow-lsf-toil/ mentions that:

    As a side note, IBM Spectrum LSF Process Manager is a workflow system running on top of LSF. There is research currently underway for LSF Process Manager to work with CWL. The first step is to convert LSF Process Manager flows to CWL. Stay tuned.

    Stian Soiland-Reyes
    @stain
    I've asked him if he wants to do a webinar :)

    Anyone used Singularity?
    HPC-focused container technology (aka like Docker).

    SSI and Cambridge has a workshop on Containers in HPC and Cloud in end of June in Cambridge.

    Michael R. Crusoe
    @mr-c
    @stain Thanks!
    Rossen Apostolov
    @rapostolo
    BSC uses Singularity, looks interesting
    Stian Soiland-Reyes
    @stain
    Don't forget that @mr-c will be presenting at the BioExcel webinar: Common Workflow Language next week: 2017-06-21! Register now at https://attendee.gotowebinar.com/register/2216112248283029250
    Stian Soiland-Reyes
    @stain
    The BioExcel Workflows Interest Group newsletter #1 is out. Webinars, CWL, workflow blocks.
    Stian Soiland-Reyes
    @stain
    https://www.youtube.com/watch?v=_yjhVTmvxLU - the CWL Viewer made with support from BioExcel.
    Michael R. Crusoe
    @mr-c
    :+1:
    Stian Soiland-Reyes
    @stain
    Next BioExcel webinar (2017-07-17) is with Open PHACTS on Building pharmacological workflow blocks for virtual screening
    http://bioexcel.eu/webinar-openphacts/
    Stian Soiland-Reyes
    @stain
    Workflows in Support of Large-Scale Science workshop (WORKS2017) - the call for papers deadline is end of July
    Stian Soiland-Reyes
    @stain
    lots of CWL presentations soon now at #BOSC2017 - starting now at ISMB (Room IV)
    Stian Soiland-Reyes
    @stain
    ELIXIR is hosting a BioContainers hackathon in Paris in two weeks time (2017-10-09) that might be of interest.
    Keywords: Creating containers, Docker, Singularity, Galaxy, CWL, BioConda, metadata, ELIXIR, training
    Stian Soiland-Reyes
    @stain
    Molecular dynamics workflows? BioExcel webinar: MDStudio, microservice based molecular dynamics workflows tomorrow (2017-10-11) by Marc van Dijk.
    Stian Soiland-Reyes
    @stain
    BioExcel Workflows interest Group newsletter #3
    tl;dr: Webinar tomorrow, BioExcel Community Forum in November, BioExcel @ Super Computing 2017
    Michael R. Crusoe
    @mr-c
    Reminder to @stain et al. to document the BYOW at the BioExcel community meeting. How did it go? :-)
    crusoe
    @mr-c:matrix.org
    [m]
    Should this channel still be used?