Where communities thrive


  • Join over 1.5M+ people
  • Join over 100K+ communities
  • Free without limits
  • Create your own community
People
Repo info
Activity
Ramakrishna Pattnaik
@rkpattnaik780
@jeevan-jp I could find the gitter handle of Kai Blin: https://gitter.im/kblin
Hope that helps.
Sarthak Sehgal
@sarthak-sehgal
@jeevan-jp you can submit the proposal draft on GSoC dashboard for review
Jeevan Prakash
@jeevan-jp
@rkpattnaik780 @sarthak-sehgal thanks
This is the link to my draft proposal.
People in this room are welcome to review.
Thanks
Ramakrishna Pattnaik
@rkpattnaik780
Yo Yehudi
@yochannah
hey @jeevan-jp - have you managed to make contact with the antiSMASH people? I don't think they hang out in this chat
Yo Yehudi
@yochannah
@rkpattnaik780 looking good! Not much to say apart from that - you address the things that matter!
all the BioJS proposals I've seen so far have been good quality :heartbeat:
if anyone is awaiting feedback from me, please let me know!
Ramakrishna Pattnaik
@rkpattnaik780
thanks @yochannah :)
Jeevan Prakash
@jeevan-jp
@yochannah I have mailed my draft propsal to gsoc@secondarymetabolites.org (as mentioned at https://obf.github.io/GSoC/contact/).
But, there is no response from anybody so far.
What should I do???
Yo Yehudi
@yochannah
@jeevan-jp hmmm, maybe try messaging @kblin or @sjshaw on Gitter?
Jeevan Prakash
@jeevan-jp
Already done. Sent a message to @kblin on April 01, no reply yet.
Shubham Awasthi
@awasthishubh
Less than a day left!✨
I hope everyone hv submitted their final proposal. πŸ‘
Even if it's not complete, I think we should submit our final proposal and the update it accordingly. πŸ§πŸ˜‰
Yo Yehudi
@yochannah
yes! :heart: :heart_decoration: That is perfect advice
Ramakrishna Pattnaik
@rkpattnaik780
Thanks @awasthishubh :)
Shubham Awasthi
@awasthishubh
πŸ˜‡
Shubham Awasthi
@awasthishubh
Try to finalize proposal as soon as possible. Site may get down due to huge traffic... Though it's google, this shouldn't happen πŸ˜›
Yo Yehudi
@yochannah
:+1:
Nikhil Vats
@Nikhil-Vats
I am working on solving this issue - biojs/biojs-frontend#92 @sarthak-sehgal .
yuechaowu
@yuechaowu
Hi guys I am new here.Just used biojs. I have encountered some problems recently. is about how to do two sequence alignment by javascript. For example, mapping CDS to DNA. I tried some NW or SW algorithm on github. but it do not work. i konw in python it can be very easy to solve by use biopython. Can someone give some advice? Thank you!
Shubham Awasthi
@awasthishubh
I'm getting a few ESLint errors/warnings on frontend repo.
@rkpattnaik780 I added a few comments to your PR
Yo Yehudi
@yochannah
@yuechaowu I'm afraid I don't think I have any suggestions for you for this one - really sorry!
Ramakrishna Pattnaik
@rkpattnaik780
@awasthishubh thanks for the review, I will make the changes soon. :+1:
Shubham Awasthi
@awasthishubh
:D
yuechaowu
@yuechaowu
@yochannah Thank you anyway!
Ibrahim Tanyalcin
@IbrahimTanyalcin
Hi everyone, kudos on the new website design. I have one question though, you used to have a tutorial for adding examples to a project, I wasn't able to find it anymore, is there a link somewhere?
I'm asking it because I forgot it :) It's been a long time since I didn't add anything new.
Shubham Awasthi
@awasthishubh
Hey @IbrahimTanyalcin!
@yochannah will be able to provide you with a better help.
Till then you can check out https://edu.biojs.net/ as most of the tutorials are here only. (It'll soon be updated with our new gsoc project :D)
Yo Yehudi
@yochannah
Thanks @awasthishubh! :heart_eyes:
Yo Yehudi
@yochannah
@IbrahimTanyalcin - this is probably the tutorial you're looking for https://edu.biojs.net/details/package_json/ - look at the snippets section. https://www.npmjs.com/package/mplexviz-ngraph has a good example
Ibrahim Tanyalcin
@IbrahimTanyalcin
@yochannah ok, I pushed a new version , hopefully it'll get picked up. Just one question, I am guessing that the sniper field in package.json is for local development ? Because I presume you are internally converting require statements like require("lexicon-mono-seq") into a valid url such as https://cdn.jsdelivr.net/npm/lexicon-mono-seq@1.2.4/lexiconMonoSeq.v0.17.3.js or whatever the main field of package.json is pointing at. Or am I completely wrong with my assumption (which means a build is rendered at your backend servers first)
Yo Yehudi
@yochannah
this is actually kind of in flux at the minute! we've found that sometimes building components successfully can be really tricky (large packages often time out, for example, or poorly defined dependencies) so we're trying to encourage people to include build versions of their files. This will also make it possible for people to implement components using a CDN link and copy/pasting a couple of lines of code rather than having to buid a package (anyone who knows a little HTML can copy/paste and tweak a component config, whereas there is a lot more knowhow required to build an npm component).
right now we try to build / prepare components where possible, but we're working on a more user friendly spec for BioJS 3.0
Yo Yehudi
@yochannah
I'll try to summon @DennisSchwartz for comment
Ibrahim Tanyalcin
@IbrahimTanyalcin
Ok sure, I asked it because jsdelivr caches everything with access-control-allow-origin as "*" including package.json as well. This means Everything can be fetched/xmlhttped as text/plain, require statement replaced and rendered at client side within an iframe via script tag. This would greatly reduce complexity you need to deal on backend => you don't need to watch versions anymore and offload everything to client. I find it reasonable.
Yo Yehudi
@yochannah
prettymuch!
Ibrahim Tanyalcin
@IbrahimTanyalcin
Hmmm, I got a legacy example warning, I had the "js" key, i'll try the buildJS, maybe that helps
Yo Yehudi
@yochannah
yes, buildJS is better if possible
Nikhil Vats
@Nikhil-Vats
Hey guys, I sent a PR - biojs/generator-biojs-webcomponents#7. Please suggest changes, if any.