These are chat archives for dereneaton/ipyrad

25th
Dec 2015
Isaac Overcast
@isaacovercast
Dec 25 2015 00:53
Cool, i'll work on it. Also, I got some energy for implementing preview mode, so if you have thoughts on how you want that to work lemme know
Isaac Overcast
@isaacovercast
Dec 25 2015 01:35
Moving stuff around I see two functions for splitting files getoptim() and getsplits(). Looks like they are more or less the same and only getsplits() is being called in the codebase. I'm thinking of ditching getoptim(), unless there's a good reason to keep it.
Isaac Overcast
@isaacovercast
Dec 25 2015 02:32
Done. Refactored a bunch of code to move common functions into ipyrad/assemble/util.py Moved functions include ambigcutters() comp() getoptim() getsplits() revcomp() unhetero() uplow() and zcat_make_temps(). Fixed all the imports from all the assemble methods, tested and it works.