These are chat archives for dereneaton/ipyrad

26th
Dec 2015
Deren Eaton
@dereneaton
Dec 26 2015 06:39
getoptim and getsplits were placeholders to remind me to come up with something more efficient. Since those steps involve breaking files into smaller chunks, processing them, and then rejoining the chunks, it will run faster if chunk sizes are optimized. Really it's only important for step1, where sometimes input files are 2GB in size, and sometimes they are 48GB in size.