These are chat archives for dereneaton/ipyrad

25th
Aug 2016
Edgardo M. Ortiz
@edgardomortiz_twitter
Aug 25 2016 02:05
Just to report that everything started to work with ipcluster...
Isaac Overcast
@isaacovercast
Aug 25 2016 03:17
@edgardomortiz_twitter Awesome, glad to hear it. Thanks for all your help sorting this out today.
Edgardo M. Ortiz
@edgardomortiz_twitter
Aug 25 2016 15:16
Another question, how to NOT trim the overhangs in the loci and still recover up to 2 samples per locus? I tried setting parameter 26 to 0, 0, 0, 0 and didn't work
Deren Eaton
@dereneaton
Aug 25 2016 15:38
Hmm, good question. I guess you can't at the moment. I'll keep that in mind, though. I'm planning to make the option more flexible and intuitive.
Edgardo M. Ortiz
@edgardomortiz_twitter
Aug 25 2016 16:19
I think I did it, I just removed the cutsites for step 7 and set param 26 to 2, 2, 2, 2 and run it again with -f flag
Deren Eaton
@dereneaton
Aug 25 2016 16:20
oh, OK, great.