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Interactive assembly and analysis of RAD-seq data sets
Feb 16 2017 18:48
What does the ipyrad_log.txt file say? Anything informative.
CHROM/POS information for reference mapped reads is coming in v0.6.0 which is getting pushed to conda TODAY!
Feb 16 2017 18:59
New Version now available:
LOTS of exciting new features:
Way way faster step 3 - aligning
Way way faster step 4
Big speed & memory improvement to step 1 - demux
CHR/POS info in VCF for reference data
2 new param names (auto updates from older version assemblies) related to trimming edges.
Improved adapter filtering for paired data
Feb 16 2017 21:20
The log file doesn't exist. I'll try the update
Feb 16 2017 21:53
Sorry, it was just hidden for some reason on this machine. I will re-run and report, thanks