These are chat archives for dereneaton/ipyrad

5th
Mar 2017
natagalle
@natagalle
Mar 05 2017 14:31

@isaacovercast @dereneaton Hi guys! I ran into this error today while running steps 6 and 7 in ipyrad 0.5.15 for SE 3RAD.
error in muscle_align_across IndexError(tuple index out of range)
2017-03-05 07:02:35,567 pid=33842 [assembly.py] ERROR IPyradWarningExit: ('error in step 6 %s', <Remote[13]:IndexError(tuple index out of range)>)

However step 6 seems to be finished. I got the s6_cluster_stats.txt file but did not get
output files.

Any thoughts on this? Thanks!!!!

Isaac Overcast
@isaacovercast
Mar 05 2017 19:37
@natagalle Try downloading the newest version (0.6.10) and rerunning step 6. There have been a ton of fixes since 0.5.15, so theres a good chance the new version will just work.