These are chat archives for dereneaton/ipyrad

10th
Sep 2017
tommydevitt
@tommydevitt
Sep 10 2017 18:18
@dereneaton Hey Deren, I'm using the ipyrad API to create an assembly, but I guess I reached the wall time limit during step 3 and the process stalled. How do I pick up where it left off? I know I need to resubmit my slurm_jupyter.sbatch script. In the API user guide it says, "If a step has already been run on your samples they will be skipped and it will print a warning." But I'm not getting any error. Where do I restart? My notebook is pretty much the same as the Pedicularis API example notebook.