These are chat archives for dereneaton/ipyrad

Dec 2017
Dec 12 2017 18:12
Does anyone have suggestions for how to obtain the data partitions (i.e., beginning to end of each locus in the phylip or nexus file) from any of the ipyrad outputs? I couldn't find anything that could do this conversion to get that info. I'd like to try a raxml analysis with data partitioned by locus. Thanks!
Dec 12 2017 21:50
@isaacovercast @dereneaton Whenever I try to load bpp on the terminal, I get an error: when opening bpp.ctl and then it prompts the for the full path to the file. It appears that when searching in miniconda/conda-bld that bpp .ctl is not there.