These are chat archives for dereneaton/ipyrad
project_diris in scratch then
ipyradwill only write output files to scratch. The only exception is the
ipyrad_logfile, which will be written to your current directory, but this should not be a very large file. However, because the error is being caught by the
loggingmodule in Python, I'm guessing that you are running out of disk in your HOME directory as a consequence of ipyrad writing to the log file. If you are running with the
-dflag then ipyrad may write a lot of information to this file. So try not using that. And if the log file is big right now you can delete it. Try opening up just a bit more space in HOME so you have more wiggle room to run things without being right on the edge of filling it up.
-dflag and post the last handful of lines of the ipyrad_log.txt