These are chat archives for dereneaton/ipyrad

8th
Aug 2018
Isaac Overcast
@isaacovercast
Aug 08 2018 00:13
Can you look at this locus in your .loci file? Can you email it to me (just this locus)?
I don't see this behavior in either simulated data or in the couple of random empirical vcf files i looked at. Is this happening regularly in your vcf or rarely?
Adrian Nieto Montes de Oca
@anietomontesdeoca_gitlab
Aug 08 2018 12:03
#249 Have you had a chance to update the phylip or nexus outputs to contain partition information as pyrad does? It would be very useful to run PartitionFinder on the alignments. Thanks.
Isaac Overcast
@isaacovercast
Aug 08 2018 18:34
@anietomontesdeoca_gitlab Haven't had a chance to do this yet. I agree it would be useful.