These are chat archives for dereneaton/ipyrad

Aug 2018
Isaac Overcast
Aug 08 2018 00:13
Can you look at this locus in your .loci file? Can you email it to me (just this locus)?
I don't see this behavior in either simulated data or in the couple of random empirical vcf files i looked at. Is this happening regularly in your vcf or rarely?
Adrian Nieto Montes de Oca
Aug 08 2018 12:03
#249 Have you had a chance to update the phylip or nexus outputs to contain partition information as pyrad does? It would be very useful to run PartitionFinder on the alignments. Thanks.
Isaac Overcast
Aug 08 2018 18:34
@anietomontesdeoca_gitlab Haven't had a chance to do this yet. I agree it would be useful.