These are chat archives for dereneaton/ipyrad

Oct 2018
Megan Smith
Oct 02 2018 12:42
Hi everyone. I'm using ipyrad on a fairly large dataset (312 individuals). Step 6 took longer than I expected to build the database, and I ran out of wall time on my cluster when nearly done with the process. All the temp files are still present. If I rerun ipyrad step 6, will the whole process have to be repeated, or will it pick up where it left off?
Eaton Lab
Oct 02 2018 14:16
Hi @meganlsmith , if you restart step 6 but do not use the force flag it should restart from where it left off.