These are chat archives for dereneaton/ipyrad
error in filter_stacks on chunk 416: IOError(Unable to open file (Unable to lock file, errno = 11, error message = 'resource temporarily unavailable')). Following suggestions by @nspope , I reinstalled h5py via conda as a first step. The other idea of replicating the error outside ipyrad I couldn't do because no
assemblyName>_acrossfolder nor a
.clust.hdf5was produced during my replication of the advanced tutorial. A
.hdf5file is actually produced (i.e.
data1.hdf5), but its within within the
iptutorial/data1_outfilesfolder. About memory/disc space, how much space will I need for the assembly of the simulated
rad_examplesdatasets in the tutorial? I am running this in 40 core shared server and using only 5 cores for the task. Thanks for any help!