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  • Apr 08 07:37
    Trophime opened #36
  • Apr 04 13:32

    prudhomm on master

    buildx failed with: error: push… (compare)

  • Apr 04 13:14

    prudhomm on master

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    prudhomm on master

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    prudhomm on master

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  • Mar 25 07:20

    prudhomm on master

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  • Mar 24 08:29

    prudhomm on master

    up docker image up image up (compare)

  • Mar 24 03:02

    prudhomm on master

    properly clean up (compare)

  • Mar 23 13:36

    prudhomm on master

    fix (compare)

  • Mar 23 13:31

    prudhomm on master

    try pull first (compare)

  • Mar 23 07:25

    prudhomm on master

    feelpp-python (compare)

  • Mar 21 20:59

    prudhomm on master

    add -1 to tag to indicate new i… up feelpp-env install in /usr fix and 3 more (compare)

  • Mar 21 20:39

    prudhomm on develop

    add python docker (compare)

  • Mar 17 12:47
    Trophime commented #33
  • Mar 17 11:00

    prudhomm on develop

    now in /usr (compare)

  • Mar 17 10:48
    prudhomm commented #33
  • Mar 17 10:46
    prudhomm labeled #35
  • Mar 17 10:46
    prudhomm labeled #35
  • Mar 17 10:44
    prudhomm assigned #35
  • Mar 17 10:42

    prudhomm on develop

    fix (compare)

Guillaume Dollé
@gdolle
I guess in newer version opengl2 is by default
Christophe Prud'homme
@prudhomm
what do you mean ?
why is opengl involved ?
ah ok renderingbackend.opengl2
Guillaume Dollé
@gdolle
yes!
Christophe Prud'homme
@prudhomm
is there a quick fix ?
Guillaume Dollé
@gdolle
I think with @vincentchabannes that's could be the problem
but we have still to check
Guillaume Dollé
@gdolle

@prudhomm for the pvserver problem, recompiling with
-DVTK_RENDERING_BACKEND=OpenGL2
solve the problem (I tested on atlas).

PS: Binary version of paraview use opengl2 vtk backend by default.

This message was deleted
Guillaume Dollé
@gdolle
Can you rerun the docker build chain ?
Christophe Prud'homme
@prudhomm
ok thx
Christophe Prud'homme
@prudhomm
@/all develop and master Feel++ docker images have been rebuilt to fix the pvserver issue mentionned by @gdolle/. Do you confirm that it is ok now @gdolle ?
Guillaume Dollé
@gdolle
This message was deleted
Guillaume Dollé
@gdolle
@prudhomm I think the image has not been regenerated/pushed on dockerhub.
Docker pull did not download upadtes.
(I still redownload the image, but paraview.5.1.renderingbackend.opengl did not changed.
Maybe it has not been pushed ?
Christophe Prud'homme
@prudhomm
@gdolle here is what I have from paraview compilation:
-- Backend OpenGL2 modules: vtkDomainsChemistryOpenGL2;vtkIOExportOpenGL2;vtkImagingOpenGL2;vtkRenderingContextOpenGL2;vtkRenderingGL2PSOpenGL2;vtkRenderingLICOpenGL2;vtkRenderingOculus;vtkRenderingOpenGL2;vtkRenderingOpenVR;vtkRenderingVolumeOpenGL2
-- Enabling modules for OpenGL2.
I will further check but new images have been uploaded (look at hub.docker.com for example)
Guillaume Dollé
@gdolle
hum.. Where is install paraview ? System wide /usr/ ?
Christophe Prud'homme
@prudhomm
/usr/local
Guillaume Dollé
@gdolle
the tag is latest ?
Christophe Prud'homme
@prudhomm
yes or ubuntu-16.10
feelpp/feelpp-env
Guillaume Dollé
@gdolle
@vincentchabannes just told me that changes in develop have not been taken into account
:/
I'll try 16.10
Vincent Chabannes
@vincentchabannes
@prudhomm I just tried with tag feelpp/feelpp-libs:ubuntu-16.10 and it’s seems that is a very old version of feel++
Vincent Chabannes
@vincentchabannes
ok, I think understand the problem. All is good with develop-ubuntu-16.10. but not for latest tag. Probably this one is linked to ubuntu-17.10 but ubuntu-17.10 is not updated at this time, no?
Guillaume Dollé
@gdolle
Ok pvserver works on feelpp/feelpp-toolboxes:develop-ubuntu-16.10
I'll add a doc in the book
Christophe Prud'homme
@prudhomm
ah yes that’s it ;)
I will move the latest tag
Guillaume Dollé
@gdolle
ok. Then I'll see with @Trophime for the hifimagnet part.
Guillaume Dollé
@gdolle
We tested with @vincentchabannes multi clients connection on the same pvserver via the container. Works well!
Guillaume Dollé
@gdolle
pvserver+Insitu ok on the docker image.
Guillaume Dollé
@gdolle
@prudhomm I just tested also with singularity, works perfectly too. insitu on atlas with fsi toolbox :+1:
Guillaume Dollé
@gdolle

For those who want to test with singularity:

module load singularity/2.2.1

then run the image that I provide

singularity shell -c -B ${HOME}/feel:/feel  /data/images/singularity_feelpp-toolboxes-develop-ubuntu-16.10.img

then

pvserver &

Here in Paraview connect to the pvserver with paraview, then connect to catalyst (port 22222 is default), pause catalyst,

mpirun -np 8 feelpp_toolboxes_fsi_2d --config-file Testcases/FSI/wavepressure2d/wavepressure2d.cfg --exporter.format=vtk --exporter.vtk.insitu.enable=1

An object will appears in paraview.
Set the object in the browser visible by clicking on the eye icon.
Put the filter "warp by vector" and set the propertie scale to 15.
Resume catalyst. And enjoy ! :)

Christophe Prud'homme
@prudhomm
@/all I relaunched the docker images build to move back the latest and stable tags to develop-ubuntu-16.10 and master-ubuntu-16.10 respectively
they should be ready in about an hour or so
Trophime
@Trophime
@prudhomm I've uploaded images for Salome and Hifimagnet. Dcokerhub reports some vulnerabilies issues when scanning the images. Do you have an idea how to fix this?
Christophe Prud'homme
@prudhomm
are they built automatically or do you do that by hand ?
Trophime
@Trophime
both are build with a script
Christophe Prud'homme
@prudhomm
sure but you execute the script yourself right ?
Trophime
@Trophime
see in docker/hifimagnet /build_hifimanget.sh and docker/salome/build_salome.sh
yes unfortunatly :(
Trophime
@Trophime
I'll need you help to automate all that but I have to fix issue with "make install" in hifimagnet first ;)
By the way I'll manage to package feelpp and feelpp-toolbox-solid. Cannot package all the toolboxes at once: it requires two much disk space!
Guillaume Dollé
@gdolle
/@all For info, singularity 2.3 should be released this wednesday 05/01/2017 with some nice features.
We should be able to use nvidia driver directly with -n option.
Also, sudo should not be required anymore for creating images/bootstrap :+1:
victorsndvg
@victorsndvg

Thanks @gdolle :+1 !

Both are great improvements in singularity usage.
I've read that cuda compatibility is very tricky with release 2.1. We will explore this version ASAP

Guillaume Dollé
@gdolle
For information. To launch X11 apps with graphic acceleration via singularity, do not use the option -c otherwise it does not share x11 env and you'll get an error like
No protocol specified
paraview: cannot connect to X server :0