These are chat archives for fiji/fiji
@ctrueden I wrapped particle analyzer and an overlay step in a command... and it seems to work, even headless.
The one thing I can't get working in a headless IJ2 is Auto Local Threshold. I guess because it is a fiji plugin...
yes...I tried adding the maven reference....
Class.forName("fiji.threshold.Auto_Local_Threshold")does it find it?