@kmader I am not aware of any way to use it as a jupyter backend. However I know there has been work on a python bridge in CellProfiler and KNIME. If you could call ops from native python with converters between imglib2 structures and numpy arrays I think you should be able to use jupyter as a backend. @hinerm is this possible with converters?? @ctrueden do you know if anyone is using CellProfiler in a notebook??