@ctrueden Thanks Curtis, I got it working. About the 3D displayer, is it out already? When I try to use it I get: java.lang.NoClassDefFoundError: org/scijava/java3d/utils/universe/SimpleUniverse, Is hyperstack viewer the only other option left?
@odinsbane what do you mean by incremental update? There's currently no possibility to define "inter-dependencies" between update sites. You can also point people to jar files built automatically by Travis and uploaded to the maven repository.
@imagejan Thanks, I did that and now I get a new error: java.util.concurrent.ExecutionException: java.lang.UnsatisfiedLinkError: Can't load library: /Users/aimachine/PreProcessingSuite/natives/macosx-universal//gluegen-rt
There is no directory called natives in my PreProcessingSuite folder
@tinevez Same error in Trackmate when I try to run it from Eclipse as a cloned repo (execture TrackMatePLugin_.java): Exception in thread "TrackMate view rendering thread" java.lang.UnsatisfiedLinkError: Can't load library: /Users/aimachine/TrackMate/natives/macosx-universal//gluegen-rt
No it works that way, I just did this to trackmate in eclipse: Right click on repo, -> Build Path -> Add external Archives -> Then add all the four jars in the Fiji macos folder that you mentioned and then it works
@odinsbane It should not be necessary to manually unpack natives from JARs in IntelliJ. The Java code is supposed to provide magic to take care of that for you. Maybe @skalarproduktraum has some insight?