dockstore workflow download --entry github.com/cancerit/workflow-seq-import/chksum_seqval_wf_interleaved_fq:0.4.0works to download the correct directory structure which is probably related to why it works that way (and might be a workaround depending on what you're working on). Right now I'm thinking that its not the indexing, but an issue with how we translate the paths for display/TRS, so it may be the case that after we fix it, it might just work. Will update in the ticket when we have more
I modified my validator temporarily, 3 are passing:
pass: GET (200) /api/v2/metadata duration: 348ms pass: GET (200) /api/v2/toolClasses duration: 308ms pass: GET (200) /api/v2/tools?limit=30 duration: 1736ms
the rest are skipped because my validator doesn't proceed further until it can retrieve a tool id, version id, and descriptor type. I'll make an issue for it. It should probably go as far as it can even without the descriptor type
workflowId. I thought this was the
idfield retrieved when doing a
https://dockstore.org/api/api/ga4gh/v1/tools/query, but this doesn't seem to work. Thanks!