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    Helena
    @hexylena
    where we can just provide the app as an input to the IT?
    would love to see this for gallantries :)
    Helena
    @hexylena
    maybe I can find time to get https://github.com/hexylena/docker-galaxy-volume/ working with all of the ITs, to give a read-only filesystem for accessing data. Could be cool.
    we need that in jupyter, rstudio, would make life so much beter.
    Björn Grüning
    @bgruening
    :100:
    Helena I will also update the jupyter notebook soon
    if you have a whishlist for missing packages
    Helena
    @hexylena
    none as of now
    Yvan Le Bras
    @yvanlebras
    Hello amazing you all!!!!
    ;)
    Not sure what is behind generic R Shiny IE (or maybe I forget something I said ;) )
    But yes we are working on providing new R Shiny apps as GxIT and there is at least in fact 2 related ideas, one is to propose a "generic" manner to create GxIT from R Shiny apps, another is to use something like shinyproxy to deploy Shiny apps.... This second idea will make the manner to deploy shiny apps on Galaxy a little bit like for deplying jupyter notebooks... So shinyproxy can be used a little bit like Jupyter lab
    Helena
    @hexylena
    I like the generic idea!
    Have never heard of shinyprozy before
    Cool :)
    We made some tests last year, quite easy to deploy and use
    Helena
    @hexylena
    Oh it's kubernetes stuff.
    Ok even more in support of generic GxIT option now :)
    Fine for the people with k8s but this is not so many groups I think that are willing to take on either the GKE bill or the person hours to manage k8s
    Yvan Le Bras
    @yvanlebras
    you mean this seems to be really relevant to consider the use of Shinyproxy to deploy R SHiny apps as GxIT ? (just to be sure ;) )
    Helena
    @hexylena
    No, just mean I'm excited for generic shiny GxIT and not so interested in shinyproxy
    Since more people can run a genetic GxIT and few can run shinyproxy
    Yvan Le Bras
    @yvanlebras
    +100
    Helena
    @hexylena
    https://live.usegalaxy.eu/u/helena-rasche/h/rstudio-demo @yvanlebras is it expected that the "species occurences" table is empty?
    I copied and pasted from the GTN
    Yvan Le Bras
    @yvanlebras
    hi Helena
    Yvan Le Bras
    @yvanlebras
    Yes, I saw it.. and I think this is due to a miodification of the GBIF API... it works with others data sources
    this is really not a happy news...
    I am on it
    I need to update the tuto
    here is a file as used for the tuto as output of the "Get species occurences data" https://ecology.usegalaxy.eu/datasets/11ac94870d0bb33ae3b4309e7498da26/display?to_ext=tabular
    3 replies
    Yvan Le Bras
    @yvanlebras
    hmmmm
    with @ColineRoyaux we made some tests @hexylena and apparently, this is the installation on eu who doesn't seems to work properly as making a fresh instal on our Galaxy instance give the good results
    Björn Grüning
    @bgruening
    Yvan Le Bras
    @yvanlebras
    Wonder Björn!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
    <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))>< <°))))><
    Helena
    @hexylena
    if we decide we need some bash lessons for gallantries, it could be a fun 'homework' for students https://gitlab.com/slackermedia/bashcrawl
    Dave Clements
    @tnabtaf
    Hi All, I added the Belgrade workshop to the Galaxy Events Page. Please let me know if anything needs to change
    2021-04-22_16-53-36-gallant.png
    Helena
    @hexylena
    thanks!
    Bérénice Batut
    @bebatut:matrix.org
    [m]
    EOSC-Life is organizing a workshop on hosting hybrid events: https://www.eosc-life.eu/news/workshop-hosting-hybrid-events/
    Fotis E. Psomopoulos
    @fpsom
    It may be a good idea to present the Gallantries :)
    1 reply
    Bérénice Batut
    @bebatut:matrix.org
    [m]
    but can we?
    or the agenda is already fixed?
    Fotis E. Psomopoulos
    @fpsom
    I think this is a request to participate and present 5'
    1 reply
    Björn Grüning
    @bgruening
    I think so, we got funding from the
    mh, we could ask Bea if she knows more
    1 reply
    Fotis E. Psomopoulos
    @fpsom
    (which will be selected of course)