planemo autoupdate- if I just run it locally it times out trying to install tools... so I'd like to use the
--profileoption... but I don't understand how profiles work... they seem to need a Galaxy URL and Galaxy user or admin API key... but I don't see where the Galaxy user is specified. Or what the database stuff is for
--galaxy_url URL --galaxy_user_key API_KEYto the command
planemo autoupdate --galaxy_url http://blah --galaxy_user_key blah workflow.gawith planemo 0.74.9 and it doesn't recognise the galaxy_url flag
planemo profile_create my_new_profile --galaxy_url http://blah --galaxy_user_key
planemo autoupdate workflow.ga --profile my_new_profile
mulled_singularityresolver or (2) (for non-IUC tools) built using the
build_mulled_singularityresolver (which actually doesn't work for me at the moment). how can this functionality be run on the command line or via API so that I can get the Singularity images for IUC tools (or potentially for non IUC tools) without running things through a Galaxy server?