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Tool error: Remote job server indicated a problem running or monitoring this job [usegalaxy.org support]
Hello,
currently I am writing my bachelors thesis and because of this I am a bioinformatics greenhorn …
I have tried to run Screen.seqs tw…
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Unable to generate report for multiQC using QualiMap RNA-Seq QC [Uncategorized]
Hello,
I am trying to generate MultiQC report from multiple QualiMap RNA-Seq QC files. I am using ‘usegalaxy.org’.
The MultiQC runs but do…
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Why there is no CDD in Interproscan? [usegalaxy.eu support]
Hi,
Why there is no CDD mapping for interproscan?
BY the way, there is currently two interproscan in the tools section…why?
Thanks!
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Interpreting a principle component analysis [usegalaxy.org support]
[Screen Shot 2021-01-20 at 7.38.23 PM]
I generated this principle component analysis what is this figure telling me. How do I interpret it…
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Galaxy not using the newly created environment for tool execution. [usegalaxy.org support] admin, tool-dev, galaxy-local
Hello,
I’m running a local galaxy installation, on a new computer running Ubuntu 20.04.
I have written some tools and uploaded them using …
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Empty collections after [usegalaxy.org support]
Hi,
Trying to upload dataset from 7 accessions in SRA using the ‘(faster) download and extract reads in fastq format from NCBI RSA’ tool. T…
Hi! I wonder if the following is a known problem? And what I can do about it? I tested a tool with multiple requirement tags on our 20.05 server instance.
I repeated the above on my local 19.05 instance. At point 4 it got messy. I can only guess, but it looked like Galaxy attempted to create a conda env in the job directory, failed, and then ran the tool anyway outside of conda.
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Unicycler job not running [usegalaxy.org support] unicycler
Hello,
I submitted a job to unicycler over 24 hours ago to the main USA galaxy server and it is still grayed out waiting to run. How long d…
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Trouble UPARSE for FASTA [usegalaxy.org support] workflow, galaxy-local, error
Hi, I am new to Galaxy. I´m trying to generate the OTU table file, by executing “UPARSE for FASTA”.
When executing the process, an error me…
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Error in Analysis [usegalaxy.org support]
Hello All
Well I am new to galaxy and even the first day user.
I am stuck in an analysis for quite long time and unable to move forward.
…