hg38 for Gemini vcf database? [Uncategorized]
Hello. Two questions
Does anyone know whether there is a gemini for hg38?
If there is not a gemini for hg38 (only hg19) what is the best …
I am a student just starting out Galaxy for the first time.
I am trying to use the CutAdapt tool to trim some reads, but I get t…
I should also ask can you disable tools by user
Hi @WilliamLyman, you can do it with Dynamic Job Destinations : https://training.galaxyproject.org/training-material/topics/admin/tutorials/connect-to-compute-cluster/tutorial.html#dynamic-job-destinations. Is it what you are looking for ?
I am trying to remove the blacklisted regions from my ChIP-Seq datasets (Mapped regions to hg19 human genome, BAM files) using bedto…
no files downloaded when I used "Download and Extract Reads in FASTA/Q format from NCBI SRA" tool [Uncategorized]
Executed Download and Extract Reads in FASTA/Q and successfully added 1 job to the queue.
The tool uses this input:
350: SRR_Acc_List (…
FilterSamReads error [usegalaxy.org support] error, filter-bam
I always fail to run the FilterSamReads. Even my input is BAM file neither form the HISAT2 nor the CleanSam.
Please guide me on how to deal…
I know that in the previous topics, some of user were facing issues with the CANU assembler to for nanopore data assembly. I am als…