Dear, Martin. Thank you for your advises. I have uploaded files what I use in X!tandem on Galaxy. Can you check them on the following GitHub URL?
Additionally, I also indicated the error messages what I received when I executed the X!tandem on Galaxy.
I'm not still familiar with GitHub. So, I'm worry about whether you can check my files and error codes. If you could not check them, please contact me again. Thank you.
Don't mean to be bothering you, but could you check my trouble mentioned above ?
tool_conf.xml.mainto make Galaxy aware of the tool, it was not found, however, when I modified
tool_conf.xml.sampleit worked. Why?
tool_config_file) then you can
cp config/tool_conf.xml.sample config/tool_conf.xmland make your modifications there.
config/tool_conf.xmlcontrary to what was indicated in http://https://galaxyproject.org/admin/tools/add-tool-tutorial/, that's why I tried first to modify the
main, and as my test was not found, I tried to modify
sample, and decided to ask my question as I found it a little bit confusing.