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    Philipp Hanslovsky
    @hanslovsky
    @ctrueden The imglyb tutorial currently returns a 404:
    https://nbviewer.jupyter.org/github/imagej/tutorials/blob/master/notebooks/3_-_Advanced_usage/3_-_ImgLyb_-_ImgLib2_+_scikit-image.ipynb
    Screenshot_20180209_125425.png
    Also, @jni suggested I present imglyb at ScyPi 2018 and I am going to submit a talk. This should spread the word.
    Yang Liu
    @kkangle
    @ctrueden @hanslovsky I believe this is a name issue, since nbviewer doesn't support file name with "+" in it. I changed the name of this file and it has no problem. https://nbviewer.jupyter.org/github/kkangle/tutorials/blob/add_ops/notebooks/3_-_Advanced_usage/3_-_ImgLyb_-_ImgLib2_scikit-image.ipynb
    Curtis Rueden
    @ctrueden
    Thank you @jangle.
    Philipp Hanslovsky
    @hanslovsky
    Thanks @kkangle :plus1:
    Curtis Rueden
    @ctrueden
    Really, autocorrect??
    Yang Liu
    @kkangle
    😊
    @ctrueden Do you want me to push it to the main repo?
    Curtis Rueden
    @ctrueden
    Yes please! You can cherry pick the rename. Actually, it is OK if you want to just merge that branch and then ask for people's feedback.
    Yang Liu
    @kkangle
    Ok!
    Philipp Hanslovsky
    @hanslovsky
    @ctrueden I was trying to verify that imagey still works with the latest Fiji. I downloaded fiji, and started ImageJ. However, when I switch to modern mode:
    • I cannot start the command finder (l), and
    • There is no menu entry "Plugins>Scripting>CPython REPL", even though I run this:
      command_info = ...
command_info.setMenuPath( MenuPath( "Plugins>Scripting>CPython REPL" ) )
ij.module().addModule( command_info )
    That used to work in the past. Are you aware of any changes that could cause this?
    Curtis Rueden
    @ctrueden
    The command finder is overridden by the search bar by default
    Philipp Hanslovsky
    @hanslovsky
    And the search bar is not available in the modern view?
    Curtis Rueden
    @ctrueden
    I do not recall if the menus get rebuilt when new modules are added but I doubt it. At least not likely in the legacy UI.
    wait... you are in modern mode?
    Sorry, I missed that above.
    Why do you need modern mode?
    Philipp Hanslovsky
    @hanslovsky
    Yes, imagey always worked only in modern mode (because of being able to add menu items from python at runtime).
    Curtis Rueden
    @ctrueden
    Why do you need to add menu items at runtime?
    Philipp Hanslovsky
    @hanslovsky
    Because I need to import jnius in order to define what should happen when the menu entry is clicked
    And jnius fires up the jvm on import
    Philipp Hanslovsky
    @hanslovsky
    @ctrueden Do we have post guidelines for the forum, in particular things like "add minimum working example", "show error log", etc? It would be helpful to point (new) users to such guidelines. I tried the FAQ link but that is not forum specific and I did not see any guidelines there.
    nvm
    found it
    http://forum.imagej.net/guidelines
    I still didn't find a link on http://forum.imagej.net/
    The only reason I found the guidelines is because, for some reason, I earned a badge for reading the guidelines and that badge had a link to the guidelines.
    Philipp Hanslovsky
    @hanslovsky
    Now I figured it out: Settings symbol (next to user profile)>About>Guidelines
    Maybe we could add a shortcut to the guidelines like this: Settings symbol (next to user profile)>Guidelines just like for the FAQ.
    Curtis Rueden
    @ctrueden
    @hanslovsky There will be a link for that once the forums combine. Any customization we do before that has a chance of being lost, if I forget we did it.
    Philipp Hanslovsky
    @hanslovsky
    Sounds reasonable to me, glad to hear it's already on the agend!
    Patrick Scheibe
    @halirutan
    Hey guys. This is a shot in the dark but I'm giving it a try anyway. One of the ImageJ plugins is the Color Deconvolution. One additional plugin for Color Deconvolution is Color deconvolution. Optimizing handling of 3D unitary optical density vectors with polar coordinates.. This plugin is backed with a small publication. As I have hacked something similar for Mathematica, I would like to take a look at the publication but despite my efforts, I cannot find a pdf for this through my university, researchgate, sci-hub, google,.. you name it.
    The paper is here on pubmed or here on the site of the journal. I someone able to provide me with a preprint or a pdf? If yes, I would be glad if someone could mail it to me. My address should be available on GitHub.
    Jan Eglinger
    @imagejan

    :point_up: February 10, 2018 4:58 PM @hanslovsky wrote:

    Do we have post guidelines for the forum, in particular things like "add minimum working example", "show error log", etc?

    Something similar -- a topic template for the Issues category -- was proposed by @stelfrich three weeks ago in a staff-only post on the forum. (I just granted you Moderator permissions, @hanslovsky, so you should now be able to see it.) I think it would be good to have something like this, yes.

    Curtis Rueden
    @ctrueden
    @imagejan Thought you might be interested in the experimental discourse-etiquette plugin which leverages the Google Perspective API. I will not set it up now, but it is exciting to watch for the near future.
    Jan Eglinger
    @imagejan
    :+1:
    Philipp Hanslovsky
    @hanslovsky
    Thanks @imagejan
    amirffff
    @amirffff
    Hi guys
    can I ask a general question?
    How do you work with imageJ in order to write scripts (Jython, Macro, Java) and why?
    thanks in advance
    Gabriel Einsdorf
    @gab1one
    https://imagej.net/Scripting
    This should give you a start
    Ellen TA Dobson
    @etadobson
    @amirffff posted on the forum this same question - so all responses can be addressed there. ^^^ The link is pasted here for others to follow.
    Jan Eglinger
    @imagejan
    @ctrueden thanks for taking care of the forum email issue. It seems that changing the IP was successful: I can't connect to http://forum.imagej.net/ right now. I guess it's just a matter of time until the DNS server gets updated?
    Connection to http://144.92.48.175/ works...
    Curtis Rueden
    @ctrueden
    @imagejan Yes, we need to wait for the DNS change. I was just about to write that in this chat room, but you beat me to it.
    Jan Eglinger
    @imagejan
    :+1:
    Curtis Rueden
    @ctrueden
    Now the question is: will emails start working again? It is highly likely, but I'm always skeptical when it comes to email.
    Jan Eglinger
    @imagejan
    Test email to myself worked :tada: