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    (just)Tomas
    @nightdismay_twitter
    Hello everyone, could anyone help me with one simple task regarding ImageJ?
    I'm biochemist so I have really low experience with graphic/desgin, but I got one important task.. I need to know how to export all XY coordinates of an object.. not just outline, but whole object.. can anyone help with that?
    Josh Moore
    @joshmoore
    hi @nightdismay_twitter You might try asking your question on http://forum.imagej.net/ (perhaps looking for similar ones first).
    Curtis Rueden
    @ctrueden
    @imagejan It seems your logo is the winner! Congratulations. The question is: how should we proceed? There was some concern over colors. I think we should create a couple of versions with different color schemes, and with/without white outline. What do you think?
    Hadrien Mary
    @hadim
    Congrats @imagejan ! I agree with creating a couple of versions with different colors.
    Kyle I S Harrington
    @kephale
    woohoo! nice @imagejan!!
    Philipp Hanslovsky
    @hanslovsky
    Congrats @imagejan !
    Jan Eglinger
    @imagejan
    :smile: :tada: thanks all for your support!
    @ctrueden yes, color schemes that fit well to bright and dark background, as well as outlined versions would be good. Thanks a lot to @awalter17 for updating my initial script to the latest imglib-roi usage. Now we'd need to generate outlines and fill with different colors ideally from this script. Also, can we use the latest imglib-roi in Jupyter/Binder notebooks already? :)
    Jan Eglinger
    @imagejan
    And we might want something nice corresponding to Fiji_Logo_3D.js for the new logo, but displayed in BDV and SciView (of course)
    Kyle I S Harrington
    @kephale
    oo @imagejan feel free to poke us about that
    Jan Eglinger
    @imagejan
    I will try to play with different logo versions on the weekend, and then ask you for opinions/improvements, @ctrueden @kephale
    Curtis Rueden
    @ctrueden
    Sounds good, thanks @imagejan.
    Stefan Helfrich
    @stelfrich
    Uhm. Did ij-1.51v-SNAPSHOT.jar get on the ImageJ update site intentionally, @ctrueden?
    Jan Eglinger
    @imagejan
    :astonished: @stelfrich it is there, but my updater doesn't pick it up. Yours?
    Stefan Helfrich
    @stelfrich
    Mine did, this morning.. @imagejan
    Ignacio Arganda-Carreras
    @iarganda
    @imagejan mine too
    Jan Eglinger
    @imagejan
    That's strange, I still don't see it:
    blob
    Curtis Rueden
    @ctrueden
    @stelfrich It was not exactly intentional, but I needed to fix the ImageJA build.
    So I pushed imagej/ImageJA@fc5a1a4.
    I guess Upload-IJ1-into-ImageJ got triggered by the push, although I didn't realize that would happen.
    Stefan Helfrich
    @stelfrich
    Interesting
    Curtis Rueden
    @ctrueden
    I double checked, and indeed all pushes to master of ImageJA trigger that job. This makes sense when only release versions are pushed to that repo.
    Stefan Helfrich
    @stelfrich
    In that case, yes..
    Curtis Rueden
    @ctrueden
    @imagejan Is ij-1.51u.jar a shadow from an update site?
    Or are you behind a crazy network, like we were in Lisbon?
    Jan Eglinger
    @imagejan
    No, the updater says I get it from the ImageJ update site, and I also tried with a different Fiji installation on a different Windows computer.
    It's true I am behind a crazy network firewall, though...
    But usual updates work as expected, with a proxy configured in ImageJ
    Curtis Rueden
    @ctrueden
    @imagejan When you browse http://update.imagej.net/jars/ do you see the new 1.51v-SNAPSHOT artifact?
    Jan Eglinger
    @imagejan
    yes
    Curtis Rueden
    @ctrueden
    And at http://update.imagej.net/ you see db.xml.gz with "01-Mar-2018 11:04 66K "?
    (Not sure what Apache does for time zones, but it should certainly be March 1)
    Jan Eglinger
    @imagejan
    yes, also
    hm
    I'll try on yet another computer, just to make sure...
    Curtis Rueden
    @ctrueden
    The only time I've seen this problem was in Lisbon, when the local network was caching a very stale version of the db.xml.gz file.
    If you are running Java 1.8.0_101 or later, you could try changing http to https in your manage update site dialog.
    Jan Eglinger
    @imagejan
    That is strange: I saw the same thing (1.51u being reported as up-to-date) on two other machines (one Windows 7, one Mac OSX), the Mac installation even was at 1.51s still and got updated to 1.51u...
    Switching to https triggered the update to 1.51v-SNAPSHOT on my debugging installation running with Java-1.8.0_144
    The others a running with the bundled 1.8.0_66 I think, and I didn't test https there.
    Not that is would be important for me, but it's a conundrum indeed.
    Curtis Rueden
    @ctrueden
    Since the switch to HTTPS works, I expect the problem is similar to Lisbon: stale HTTP cache of the network. We will avoid it in future by migrating everything to HTTPS.
    Jan Eglinger
    @imagejan
    Is there a way to display an image with a specific color map in a Jupyter notebook? If yes, is there some example somewhere in imagej/tutorials?
    Curtis Rueden
    @ctrueden
    @imagejan With a Python notebook, or SJJK notebook? Or you don't care which?
    Jan Eglinger
    @imagejan
    Img
    Jan Eglinger
    @imagejan
    ??? My posts from mobile vanished?
    I said I have an SJJK notebook. But anything is fine to display an Img with color map.
    Curtis Rueden
    @ctrueden
    The display mechanism between Python and SJJK is fundamentally different.
    SJJK implements its own image output.