Ben Soares
stopped progress on JVO-24 - Make Jalview version archive available via getdown
Ben Soares
changed the status to Ready for testing on JAL-4004 - Reconfigure how releases.html, whatsnew.html and hugo version release markdown are generated
Ben Soares
changed the status to Ready for testing on JAL-3989 - Make a combined JSON data file for all installers, shadow jar and JVL file for use in hugo.
In SeqAnnotationServiceCalcWorker#updateResultAnnotaiton
line ~704 what was this block supposed to do?
SequenceI aseq = null;
/**
* transfer sequence refs and adjust gapmap
*/
if (ala.sequenceRef != null)
{
SequenceI seq = running.getSeqNames()
.get(ala.sequenceRef.getName());
aseq = seq;
while (seq.getDatasetSequence() != null)
{
seq = seq.getDatasetSequence();
}
}
It looks like it was meant to get the original sequence dataset, but the variable seq
, which the dataset is assigned to, is gone after leaving the if block. I'm not sure whether aseq
should be a dataset and it's a bug, or an original sequence and the loop is redundant.
Foo
class that I want to test. The consensus is to put all Foo
-related tests into a public TestFoo
class. Now, let's consider a following scenario, I want to perform two distinct sets of tests on two Foo
instances one initialised with dataset A and the other with B. I can't have them in a single class with a single @BeforeClass
any more. What's the right way to group tests in testng so they have different setups?
Gradle suite > Gradle test > jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scales_longSequence FAILED
10-May-2022 18:34:48 java.lang.AssertionError at SeqPanelTest.java:1037
is a reliable issue.