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    Žiga Avsec
    @Avsecz
    Hi everyone. The workshop code and instructions are here: https://github.com/kipoi/examples
    Jon Bloom
    @jbloom22
    Hi Ziga, looking forward to it!
    Žiga Avsec
    @Avsecz
    Hi Jon!:) Me too:)
    Let me know if anyone has trouble installing the packages or running the tests.
    Jon Bloom
    @jbloom22
    Everything installed and ran smoothly except I nothing the following ignored exception in the DeepSea command:
    kipoi test DeepSEA/predict --source=kipoi
    INFO [kipoi.sources] Update /Users/jbloom/.kipoi/models/
    Already up to date.
    INFO [kipoi.model] Downloading model arguments weights from https://zenodo.org/record/1466993/files/deepsea_predict.pth?download=1
    Downloading https://zenodo.org/record/1466993/files/deepsea_predict.pth?download=1 to /Users/jbloom/.kipoi/models/DeepSEA/predict/downloaded/model_files/weights/89e640bf6bdbe1ff165f484d9796efc7
    100%|█████████████████████████████████████████████████▉| 211M/211M [00:23<00:00, 9.34MB/s]INFO [kipoi.pipeline] dataloader.output_schema is compatible with model.schema
    INFO [kipoi.pipeline] Initialized data generator. Running batches...
    Downloading https://raw.githubusercontent.com/kipoi/kipoiseq/master/tests/data/intervals_51bp.tsv to /Users/jbloom/.kipoi/models/DeepSEA/predict/downloaded/example_files/intervals_file
                           Downloading https://raw.githubusercontent.com/kipoi/kipoiseq/master/tests/data/hg38_chr22_32000000_32300000.fa to /Users/jbloom/.kipoi/models/DeepSEA/predict/downloaded/example_files/fasta_file
                           INFO [kipoi.pipeline] Returned data schema correct
    INFO [kipoi.pipeline] predict_example done!
    Downloading https://s3.eu-central-1.amazonaws.com/kipoi-models/predictions/14f9bf4b49e21c7b31e8f6d6b9fc69ed88e25f43/DeepSEA/predict/predictions.h5 to /Users/jbloom/.kipoi/models/DeepSEA/predict/downloaded/model_files/test.expect.h5
                                                                                             INFO [kipoi.cli.main] Testing if the predictions match the expected ones in the file: /Users/jbloom/.kipoi/models/DeepSEA/predict/downloaded/model_files/test.expect.h5
    INFO [kipoi.cli.main] Desired precision (number of matching decimal places): 6
    INFO [kipoi.cli.main] All predictions match
    INFO [kipoi.cli.main] Successfully ran test_predict
    Exception ignored in: <bound method tqdm.__del__ of 211MB [00:26, 9.34MB/s]>
    Traceback (most recent call last):
      File "/Users/jbloom/anaconda/envs/kipoi-shared__envs__kipoi-py3-keras2/lib/python3.6/site-packages/tqdm/_tqdm.py", line 931, in __del__
        self.close()
      File "/Users/jbloom/anaconda/envs/kipoi-shared__envs__kipoi-py3-keras2/lib/python3.6/site-packages/tqdm/_tqdm.py", line 1133, in close
        self._decr_instances(self)
      File "/Users/jbloom/anaconda/envs/kipoi-shared__envs__kipoi-py3-keras2/lib/python3.6/site-packages/tqdm/_tqdm.py", line 496, in _decr_instances
        cls.monitor.exit()
      File "/Users/jbloom/anaconda/envs/kipoi-shared__envs__kipoi-py3-keras2/lib/python3.6/site-packages/tqdm/_monitor.py", line 52, in exit
        self.join()
      File "/Users/jbloom/anaconda/envs/kipoi-shared__envs__kipoi-py3-keras2/lib/python3.6/threading.py", line 1053, in join
        raise RuntimeError("cannot join current thread")
    RuntimeError: cannot join current thread
    Žiga Avsec
    @Avsecz
    Great. This tqdm error can be ignored.
    Žiga Avsec
    @Avsecz
    Hi all, thanks for attending! Let me know if you have any further questions/issues regarding the tutorial. I'll be more than happy to help.