These are chat archives for nextflow-io/nextflow

May 2015
Jose Espinosa-Carrasco
May 12 2015 09:26
Hey there!
With this piece of code I get a print for each item in the channel, however I only get the process executed one time and I don't know why
process test {
    file 'bed_by_tr_f' from bed_by_tr3

    set file('foo') into bed_recordings


    println ( "++++++++++++++++++$bed_by_tr_f" )

    cat ${bed_by_tr_f} > foo
Jose Espinosa-Carrasco
May 12 2015 09:34
I just needed a flat, sorry... :worried:
Paolo Di Tommaso
May 12 2015 09:54
Andrew Stewart
May 12 2015 23:05
Any idea why an input file might be visible outside of docker, and visible via ls within a container but not accessible?