These are chat archives for nextflow-io/nextflow

14th
Jan 2016
wuyilei
@wuyilei
Jan 14 2016 05:12
@pditommaso Thx. we will try later. btw: recenctly we got "too many open files" error, is this related to nextflow?
Paolo Di Tommaso
@pditommaso
Jan 14 2016 08:53
@wuyilei I've never see such error with nextflow. Could you open an issue on github reporting the exact error message and the .nextflow.log file ?
wuyilei
@wuyilei
Jan 14 2016 10:20
@pditommaso done with reporting on github. thank you for the help.
i also post the error log here, in case somebody know how to solve the issue or meet the same problem.
sambamba-markdup: Cannot open or create file './sambamba-pid6283-ztgh/sorted.50.bam' : Too many open files
Paolo Di Tommaso
@pditommaso
Jan 14 2016 10:23
Quick answer: is not a nextflow issue . Read more nextflow-io/nextflow#100