These are chat archives for nextflow-io/nextflow

26th
Jan 2016
Tiffany Delhomme
@tdelhomme
Jan 26 2016 15:59
Hi Paolo, I've got a problem with nf... here is the script I would run https://github.com/tdelhomme/nextflow_toys/blob/master/test_execute.nf, to test three conditions for my bed file, including calls to execute() from groovy which does not work... i am not sure this way could work, could you look at that? thanks!
Paolo Di Tommaso
@pditommaso
Jan 26 2016 16:11
@tdelhomme what 's not working?
Paolo Di Tommaso
@pditommaso
Jan 26 2016 16:28
@tdelhomme I think the problem is that execute() is not synchronous
You will need to call waitFor to stop and wait it completes