These are chat archives for nextflow-io/nextflow

8th
Jul 2016
Robert Syme
@robsyme
Jul 08 2016 06:36
I'm having trouble resuming workflows that include a regex step during a channel mapping: https://asciinema.org/a/c8c3fjwquvgi0lb2zg19ow8qi
https://gist.github.com/robsyme/85ca8e50c7e1a06db003dd1a8b485187
Robert Syme
@robsyme
Jul 08 2016 06:42
I've been trying to figure out why the matcher construction would be different between the denovo and the resume runs.
Robert Syme
@robsyme
Jul 08 2016 06:53
Seems to be something about running the regex matcher inside "script:"...
Robert Syme
@robsyme
Jul 08 2016 07:12
I've fixed it by moving the regex matching out of script and into a channel mapping :)
Paolo Di Tommaso
@pditommaso
Jul 08 2016 10:41
ah, that's a problem in the regex deserialisation
you can also fix it prefixing the regex definition with a def at this line
could you please open an issue for that
@robsyme by the way your presentations with asciicinema are super-cool :)