These are chat archives for nextflow-io/nextflow

24th
Aug 2016
Johan Viklund
@viklund
Aug 24 2016 12:12
Looks like I can't have workdirectories with spaces in them when running under slurm
#SBATCH -D /home/rajohvik/glob/work with space/f7/13abef8498b4054723aa11af1999fa
those spaces should probably be escaped somehow
putting the directory in quotes solves it, I'll submit a bug
Johan Viklund
@viklund
Aug 24 2016 12:23
issue #218 posted :D
Paolo Di Tommaso
@pditommaso
Aug 24 2016 12:32
oh, when I will write the nextflow file system, I will ban blanks on file name :)
kidding apart, thanks for reporting that
Johan Viklund
@viklund
Aug 24 2016 12:32
Agreed though that spaces are a PITA