These are chat archives for nextflow-io/nextflow

2nd
Dec 2016
Félix C. Morency
@fmorency
Dec 02 2016 14:28
@pditommaso are scripts in bin/ supposed to be uploaded to compute nodes (ignite)?
Paolo Di Tommaso
@pditommaso
Dec 02 2016 14:29
nope
you should run it from a share folder
Félix C. Morency
@fmorency
Dec 02 2016 14:30
ok so the pipeline itself needs to be on the network. gotcha
Paolo Di Tommaso
@pditommaso
Dec 02 2016 14:31
another strategy is to pack also your custom scripts in a docker image
Félix C. Morency
@fmorency
Dec 02 2016 14:31
true
thanks
Paolo Di Tommaso
@pditommaso
Dec 02 2016 14:36
:ok_hand:
Félix C. Morency
@fmorency
Dec 02 2016 19:00
do you guys have a (web) interface to launch (nf) jobs on a cluster using some selected dataset?
i only know of cbrain
Paolo Di Tommaso
@pditommaso
Dec 02 2016 19:01
nope
what's cbrain ?
Paolo Di Tommaso
@pditommaso
Dec 02 2016 19:04
I see, not related to NF
Félix C. Morency
@fmorency
Dec 02 2016 19:04
not exactly but not too far away either
Paolo Di Tommaso
@pditommaso
Dec 02 2016 19:04
there are some ideas
at some point we will have an UI as well
Félix C. Morency
@fmorency
Dec 02 2016 19:05
oh yeah? any doc/papers about that I can read?
Paolo Di Tommaso
@pditommaso
Dec 02 2016 19:09
no sorry
Félix C. Morency
@fmorency
Dec 02 2016 19:10
no problem. im interested :)
Paolo Di Tommaso
@pditommaso
Dec 02 2016 19:10
indeed, it's one of the most requested feature
Mike Smoot
@mes5k
Dec 02 2016 19:39
Hi Paolo @pditommaso is there a way to tag the instances created for the ignite cluster created by nextflow cloud?
Paolo Di Tommaso
@pditommaso
Dec 02 2016 19:40
they are, do you mean custom tags ?
Mike Smoot
@mes5k
Dec 02 2016 19:41
Yeah, I'd like to be able to tag machines as production, which project they're a part of and things like that.
Just for bookkeeping on our end.
Paolo Di Tommaso
@pditommaso
Dec 02 2016 19:41
no, it sounds a nice feature
you may want to open an issue for that
Mike Smoot
@mes5k
Dec 02 2016 19:42
ok, no problem. I'll open a ticket. Thanks!
Paolo Di Tommaso
@pditommaso
Dec 02 2016 19:42
how is going your experience in the cloud so far ?
Mike Smoot
@mes5k
Dec 02 2016 19:44
So far, so good! I've been able to run multiple pipelines without any real issue. The next problem for me is integrating into our production environment.
Paolo Di Tommaso
@pditommaso
Dec 02 2016 19:45
cool