These are chat archives for nextflow-io/nextflow
source(myfunctions.R)from each script that nextflow uses, but I cannot find an easy way to do it.
source("../../../src/bin/utils.R", chdir=T). R is cool for statistics but still has a long way to go concering general purpose programming
binfolder together with all scripts needed in the pipeline
chdiroption in R
baseDiras a parameter to that script
-process.echo trueon the run command line for all pipeline processes
publishDirstore the outputs in a directory of your choice