These are chat archives for nextflow-io/nextflow
Hello, I am just getting started with this tool and it appears that nextflow is not interacting w/ docker
I tried working from https://github.com/nextflow-io/examples and running
nextflow run fasta_record.nf
Which is the first example that really needs a docker image fails.
the failure is the blastp package, that is not installed on the host.
nextflow.configmust be located in the launch directory
In the latter case the examples below marked with a * character need to be run adding the -with-docker command line option.