These are chat archives for nextflow-io/nextflow

15th
Apr 2018
Alexander Peltzer
@apeltzer
Apr 15 2018 09:37
I don't think that there is something like that - if you're keen, check out http://nf-core.github.io/ where the testing of the entire pipeline with CI is explained a bit more in detail
But since its groovy, you might be able to use some testing frameworks for groovy and test NXF scripts ...
Paolo Di Tommaso
@pditommaso
Apr 15 2018 15:45
@yamad you can externalise process commands as bash/phyton/perl scripts and test each of them indipendently