These are chat archives for nextflow-io/nextflow
errorStrategy ‘retry’in my process, how many times by defaut NF will try to recover it?
Missing output file(s) '.command.log' expected by process 'align'. I have a suspicion this may be related to file system slowness on our cluster, or would there be a better nextflow-related cause for this?
-resumefeature work, I think
-resume. For example in one of my pipelines, I have a unique 'work' dir for each time I run it, along with outputting all the Nextflow logs there. The code for this is https://github.com/NYU-Molecular-Pathology/lyz-nf/blob/master/Makefile#L40
-resume? Not sure if it will work but might be worth a shot.