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  • Jan 31 2019 22:52
    matq007 commented #261
  • Jan 31 2019 22:49
    matq007 edited #261
  • Jan 31 2019 22:46
    matq007 opened #261
  • Jan 31 2019 14:33
    ewels edited #252
  • Jan 31 2019 14:33
    ewels commented #252
  • Jan 31 2019 13:29
    pachiras commented #252
  • Jan 31 2019 12:34
    matq007 assigned #252
  • Jan 31 2019 11:53
    apeltzer commented #252
  • Jan 31 2019 10:51
    matq007 commented #252
  • Jan 31 2019 08:22
    apeltzer commented #252
  • Jan 31 2019 02:13
    pachiras commented #252
  • Jan 29 2019 20:42
    af8 starred nf-core/tools
  • Jan 29 2019 08:47

    nf-core-bot on api-doc

    Travis build: 816 (compare)

  • Jan 29 2019 08:42

    apeltzer on dev

    Markdown parsing: Fix all the e… Add new markdown rules to templ… Apparently whitespace isn't eno… and 2 more (compare)

  • Jan 29 2019 08:42
    apeltzer closed #260
  • Jan 28 2019 23:42
    ewels synchronize #260
  • Jan 28 2019 23:07
    ewels synchronize #260
  • Jan 28 2019 22:57
    ewels synchronize #260
  • Jan 28 2019 22:57
    ewels review_requested #260
  • Jan 28 2019 22:57
    ewels review_requested #260
Phil Ewels
@ewels
yes exactly
using singularity hub has been very problematic though, so not an easy solution as we originally thought
but yes, leaving it half-hanging as a solution is not ideal
@apeltzer - did we ever try building on travis? I guess it takes too long?
Could be a good thing for Travis / GitHub actions etc to automatically build the docker image, convert to singularity and then push to singularity hub perhaps.
As I think it's just the automatic builds on singularity hub which won't work.
Sven F.
@sven1103
the shub api does not allow to push from remote i think
we had that discussion before if i remember correctly
Phil Ewels
@ewels
ah damn
Sven F.
@sven1103
that was the issue
so i voted for an own registry
Phil Ewels
@ewels
ah right, and then I said no we don't want our own hardware involved probably
Sven F.
@sven1103
or we get rid of singularity container registry support
yes, I remember you said sth like that
which I agree in principle
Phil Ewels
@ewels
I'm starting to wonder if we are going to need to set up some hardware at some point to keep scaling - singularity images and larger test sets
Sven F.
@sven1103
Lets put this on out phone call agenda next week
:)
can discuss some ideas
Phil Ewels
@ewels
:+1:
Sven F.
@sven1103
hardware and storage should not be an issue here
Phil Ewels
@ewels
hah, famous last words...
Sven F.
@sven1103
:D
I am more cautious of maintenance effort for self-hosted systems
thats what bothers me more
Phil Ewels
@ewels
true
Paolo Di Tommaso
@pditommaso
I think singularity hub is going to be deprecated in favour of Singularity library
Sven F.
@sven1103
ah nice
thanks for sharing Paolo!
Paolo Di Tommaso
@pditommaso
not sure, but I think they are going to provide an on-premises version
BTW have you moved to slack ?
Sven F.
@sven1103
yup
you can join using this link http://nf-core-invite.herokuapp.com
Paolo Di Tommaso
@pditommaso
I think I've joined but I don't remember the login url anymore .. this why I don't like slack :satisfied:
KochTobi
@KochTobi
Sven F.
@sven1103

I think I've joined but I don't remember the login url anymore .. this why I don't like slack :satisfied:

:joy:

KochTobi
@KochTobi
damn without the -
Sven F.
@sven1103
yup
Paolo Di Tommaso
@pditommaso
ahhh :joy:
KochTobi
@KochTobi
always gets me....
Sven F.
@sven1103
nf-core was already taken
-.-
Paolo Di Tommaso
@pditommaso
ohh, that's why I was not able to login there :satisfied:
Screenshot 2018-12-04 at 20.53.26.png
KochTobi
@KochTobi
Manage passwords ...
Sven F.
@sven1103
omg
Paolo Di Tommaso
@pditommaso
this think they have a different password for each channel I will never digest ..
Sven F.
@sven1103
yeah, this is kind of annyoing
Paolo Di Tommaso
@pditommaso
should I launch a nextflow channel on spectrum .. :satisfied: