People,
I signed up here some time ago but never got around to doing anything interesting with my (and my parents and two siblings) 23andMe stuff past doing a Promethease report as well. Now one sibling wants to extend the testing to her children and some in-laws. There seems to be some hassle with people ordering on 23andMe from Australia now so I went looking at the alternatives - overall, MyHeritage appears to be the best combo of Genetics and Genealogy choice - do people here have preferences / suggestions? It would be nice if openSNP had grown to the scale of some of the commercial ops DBs . . but I guess that is not the way of the world . .
Thanks,
Phil.
I signed up here some time ago but never got around to doing anything interesting with my (and my parents and two siblings) 23andMe stuff past doing a Promethease report as well. Now one sibling wants to extend the testing to her children and some in-laws. There seems to be some hassle with people ordering on 23andMe from Australia now so I went looking at the alternatives - overall, MyHeritage appears to be the best combo of Genetics and Genealogy choice - do people here have preferences / suggestions? It would be nice if openSNP had grown to the scale of some of the commercial ops DBs . . but I guess that is not the way of the world . .
Thanks,
Phil.
I think here in Australia, ancestry.com is the biggest provider? at least the one that advertises the most :) they give you your raw data too: https://support.ancestry.com.au/s/article/Downloading-AncestryDNA-Raw-Data
'professional' projects like dna.land and others who have proper staff etc. have grown relatively large, and I'm happy with them :) I think we'd struggle a lot (computationally) if we'd work on that scale
'professional' projects like dna.land and others who have proper staff etc. have grown relatively large, and I'm happy with them :) I think we'd struggle a lot (computationally) if we'd work on that scale
I’m not sure whether Ancestry allows that too
It looks like we might stick with 23andMe just for the convenience of most of the family already being there . .
I know what you mean about scaling and processing but for some years I have been following:
which could potentially offer a distributed store of data and possibly processing . . it would be great to have an inexpensive store and comparison of nearly ALL the data from the commercials . .
How have I not seen this amazing title for a study using openSNP data? https://www.researchgate.net/profile/Philippe_Henry/project/420andMe-crowdsourcing-the-Cannabis-Human-relationship/attachment/579814f108ae3f3ee55d4ab2/AS:388280215457793@1469584625562/download/420andMe_proposal.pdf?context=ProjectUpdatesLog
I didn't see that dna.land is closing down/relaunching as a commercial service? https://medium.com/@dl1dl1/dna-land-is-relaunching-34f5a505504f
I like this: 'Please note that because DNA.Land is closing as a research project, all accounts and data will be permanently deleted and erased from the DNA.Land servers on September 30th, 2019. You will be able to recreate an account on DNA.Land 2.0 and upload your data just as you did when you signed up to join DNA.Land.'
oh. the harddrive is full\
i think our automated cleanup of older zip archives doesn’t work, that’s why it just keeps adding them :D
Hi, hello!
I'm interested in doing some genome-wide, "population-long" association studies between genotypes and phenotypes, with the motivation being just self-education and training in this sort of analyses, trying out different statistics and algorithms etc. First I was planning on simulating data with HAPGEN2, but then I stumbled upon openSNP. I was wondering if You know of any existing projects that use openSNP data for discovering phenotype associations? Also, maybe You can recommend any software tools for converting the genotypes from openSNP into a uniform file format, like VCF?
I'm interested in doing some genome-wide, "population-long" association studies between genotypes and phenotypes, with the motivation being just self-education and training in this sort of analyses, trying out different statistics and algorithms etc. First I was planning on simulating data with HAPGEN2, but then I stumbled upon openSNP. I was wondering if You know of any existing projects that use openSNP data for discovering phenotype associations? Also, maybe You can recommend any software tools for converting the genotypes from openSNP into a uniform file format, like VCF?
hey @olszewskip! There was one crowdsourced AI challenge done with the data that would fit your description: https://www.crowdai.org/challenges/opensnp-height-prediction
They also created an open source pipeline to prepare the data from openSNP for the challenge: https://github.com/onaret/opensnp-cohort-maker
@olszewskip if there’s no email around let me know and i’ll look through my archives and find it
