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Gaurav Jain
@jaingaurav
[fpdgl (reggioca8NL81L)] ▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄ ##FEMINISM IS OFFERING TRAINING IN TAPPING INTO YOUR INNER FETISHES!! EL IS IN #FREENODE FOR ANY QUESTIONS gthlbu: sagarC yo61 qchris ▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄
[fpdgl (reggioca8NL81L)] ▄▄▄▄▄▄▄▄▄▄▄▄▄ ##FEMINISM IS OFFERING TRAINING IN TAPPING INTO YOUR INNER FETISHES!! EL IS IN #FREENODE FOR ANY QUESTIONS zgeghdssjx: shortdudey123 dlloyd_ qchris ▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄▄
Gaurav Jain
@jaingaurav
[209.6.72.161 - http://webchat.freenode.net (Anthony)] Anybody figure out how to install Diamond on Mac High Sierra?
[209.6.72.161 - http://webchat.freenode.net (Anthony)] I get this error from running diamond after installing from PyPI
[209.6.72.161 - http://webchat.freenode.net (Anthony)] "ERROR: Config file: /etc/diamond/diamond.conf does not exist."
[209.6.72.161 - http://webchat.freenode.net (Anthony)] creating a conf file in that directory however doesn't end well
Ghost
@ghost~598345d2d73408ce4f6ff925
Anyone have any idea?
Gaurav Jain
@jaingaurav
[purple (Slydder)] hey all
Charles Williams
@Slydder
hey all
I am sending metrics to influxdb for use in grafana
noticed that everything is sent as a series. is there a way to change this?
Gaurav Jain
@jaingaurav
[Wes (wes_dillingham)] anyone know of diamond collectors that measure endurance or p/e cycles on flash media?
Gaurav Jain
@jaingaurav
[37.204.15.206 - http://webchat.freenode.net (parrot)] Hi everyone, I'm installing diamond for the first time on Ubuntu. I used `pip install diamond` both as normal user (ubuntu) and as root, but installation doesn't seem to create any handlers or collectors in /etc/diamond/handlers/ or /usr/share/diamond/handlers/
[37.204.15.206 - http://webchat.freenode.net (parrot)] (values from diamond.conf.example)
[37.204.15.206 - http://webchat.freenode.net (parrot)] did I miss something during installation? how do I create those folders?
Gaurav Jain
@jaingaurav
[37.204.15.206 - http://webchat.freenode.net (parrot)] ok, looks like I need to follow instruction in docs, not on github and build a deb package
zejunyan
@zejunyan

Hi, guys. I am using diamond within humann2, and having several problems. first of all, /usr/local/bin/diamond blastx --query /mnt/Pella/Processing/NGS-working/zyan/shotgun_metagenomics/hummann2_analysis/demo/demo_fastq/demo_humann2_temp/demo_bowtie2_unaligned.fa --evalue 1.0 --threads 1 --max-target-seqs 20 --outfmt 6 --db /usr/local/lib/python2.7/dist-packages/humann2/data/uniref_DEMO/uniref90_demo_prots --out /mnt/Pella/Processing/NGS-working/zyan/shotgun_metagenomics/hummann2_analysis/demo/demo_fastq/demo_humann2_temp/tmpzfNN0j/diamond_m8_tMNaW8 --tmpdir /mnt/Pella/Processing/NGS-working/zyan/shotgun_metagenomics/hummann2_analysis/demo/demo_fastq/demo_humann2_temp/tmpzfNN0j
03/30/2018 11:28:02 AM - humann2.utilities - DEBUG: Usage: diamond [options]

diamond: error: no such option: --query

why diamond does not have "--query" option, where the user manual clearly states that this option is there

Hi, guys. I am using diamond within humann2, and having several problems. first of all, /usr/local/bin/diamond blastx --query /mnt/Pella/Processing/NGS-working/zyan/shotgun_metagenomics/hummann2_analysis/demo/demo_fastq/demo_humann2_temp/demo_bowtie2_unaligned.fa --evalue 1.0 --threads 1 --max-target-seqs 20 --outfmt 6 --db /usr/local/lib/python2.7/dist-packages/humann2/data/uniref_DEMO/uniref90_demo_prots --out /mnt/Pella/Processing/NGS-working/zyan/shotgun_metagenomics/hummann2_analysis/demo/demo_fastq/demo_humann2_temp/tmpzfNN0j/diamond_m8_tMNaW8 --tmpdir /mnt/Pella/Processing/NGS-working/zyan/shotgun_metagenomics/hummann2_analysis/demo/demo_fastq/demo_humann2_temp/tmpzfNN0j
03/30/2018 11:28:02 AM - humann2.utilities - DEBUG: Usage: diamond [options]

diamond: error: no such option: --query

why diamond does not have "--query" option, where the user manual clearly states that this option is there
_

@Slydder Hi, guys. I am using diamond within humann2, and having several problems. first of all, /usr/local/bin/diamond blastx --query /mnt/Pella/Processing/NGS-working/zyan/shotgun_metagenomics/hummann2_analysis/demo/demo_fastq/demo_humann2_temp/demo_bowtie2_unaligned.fa --evalue 1.0 --threads 1 --max-target-seqs 20 --outfmt 6 --db /usr/local/lib/python2.7/dist-packages/humann2/data/uniref_DEMO/uniref90_demo_prots --out /mnt/Pella/Processing/NGS-working/zyan/shotgun_metagenomics/hummann2_analysis/demo/demo_fastq/demo_humann2_temp/tmpzfNN0j/diamond_m8_tMNaW8 --tmpdir /mnt/Pella/Processing/NGS-working/zyan/shotgun_metagenomics/hummann2_analysis/demo/demo_fastq/demo_humann2_temp/tmpzfNN0j
03/30/2018 11:28:02 AM - humann2.utilities - DEBUG: Usage: diamond [options]

diamond: error: no such option: --query

why diamond does not have "--query" option, where the user manual clearly states that this option is there
_

Jacob D'Onofrio
@jdonofrio728
Out of curiosity, are the maintainers still reviewing PR's?
Gaurav Jain
@jaingaurav
[zprxo1.usr.onet.pl/213.180.137.170 (Marcin__)] How to debug why my PingCollector is not working
[zprxo1.usr.onet.pl/213.180.137.170 (Marcin__)] at /etc/diamond/collectors/PingCollector.conf i've got enabled = True
[zprxo1.usr.onet.pl/213.180.137.170 (Marcin__)] but when i'm checking it by diamond-setup --print -C PingCollector the result is 'enabled': False
Gaurav Jain
@jaingaurav
[182.71.38.66 - http://webchat.freenode.net (mani_)] hi, want to read the source code of diamond. Where do I start? any suggestions
[182.71.38.66 - http://webchat.freenode.net (mani_)] cloned it and opened in pycharm
Manikanta
@manikanta-kondeti
hi, want to read the source code of diamond. Where do I start? any suggestions
currently, cloned it and opened in pycharm
Gaurav Jain
@jaingaurav
[irfusayed (irfusayed)] hello
[irfusayed (irfusayed)] can someone please help on setting url in diamond.conf file to point to hosted graphite server
Gaurav Jain
@jaingaurav
[Got ZNC? (dlloyd)] are you really going through the channel list and messaging each person
[Got ZNC? (dlloyd)] ...i guess there are only 5 people
[Got ZNC? (dlloyd)] nevermind
Gaurav Jain
@jaingaurav
[98.160.83.13 - http://webchat.freenode.net (User6788)] so anyone actually here
Gaurav Jain
@jaingaurav
Gaurav Jain
@jaingaurav
[50.245.73.94.ip.orionnet.ru/94.73.245.50 (lolo_)] Prompt how to be, I want to use diamond for monitoring disk utilization
[50.245.73.94.ip.orionnet.ru/94.73.245.50 (lolo_)] What should be the chain? I want to use grafana for the interface
Amit Roushan
@akroushan_twitter
Hello.. Any graphana template for diamond metrics?
Gaurav Jain
@jaingaurav
[103.231.232.100 - http://webchat.freenode.net (feroz)] Installed diamond on the node where i want to grab my cassandra metrics and poll to my graphite server, However this doesnt work
Gaurav Jain
@jaingaurav
[69.191.176.33 - http://webchat.freenode.net (tinamanea)] hi! I'm using diamond for rabbitmq and in my logs I see a huge number of traces looking like this: [2018-08-30 00:03:06,681] [MainThread] 0 (this is all, just a number, no other markers). I've looked at the code but have no clue what produces them. does anyone know?
connexion2000
@connexion2000
hi,
can I have 2 config for one collector type? For example 2 config for FilesCollector from 2 different dirs?
Gaurav Jain
@jaingaurav
[94.143.40.205 - http://webchat.freenode.net (itblast)] Hello there! Is the repository https://github.com/python-diamond/Diamond still under development? I see a lot of unmerged pull-requests there.
Gaurav Jain
@jaingaurav
[klavs (FiXion)] hi guys.. is no one merging PR's for diamond anymore?
Gaurav Jain
@jaingaurav
[62.245.156.58 - http://webchat.freenode.net (Dagda)] Hi. Haven't used an IRC channel in over 20 years. Please be patient if I break any rules! I have a question about the Diamond MemoryCollector. Is there anyone here that can help?
Gaurav Jain
@jaingaurav
[62.245.156.58 - http://webchat.freenode.net (Dagda)] While putting together a graph in Kibana to show memory use on my servers, can you say what combination of attributes I can use to show to how my 16GB is divided up? With the attributes provided by the MemoryCollector, there is some overlap. Which attrbutes can be grouped together that will always sum to 16GB? I guess there's more than one set...
Gaurav Jain
@jaingaurav
[nat-outgoing-int-003.office.bol.com/91.195.1.42 (Robino_)] is somebody still active on the development of Diamond?
Gaurav Jain
@jaingaurav
[https://webchat.freenode.net (mustafa35)] hello
[https://webchat.freenode.net (mustafa35)] has anyone had some luck installing diamond in CentOS 8?