emmanuelle on gh-pages
Deployed to GitHub Pages (compare)
stefanv on main
Update GH actions (#6382) (compare)
I have loaded CT dicom images. I want to segment the tissue within the CT. E.g. I want to determine there is 30% soft tissue 45% bone tissue, 20% air etc ... based on hounsefield units.
Anyone an expert in biomedical image analysis with scikit image?
Any useful libraries?
Looking for help. Thanks ☺️
Hi everyone; we're going to try something new for the chat forum. Please direct your browsers to:
(or download the app)
We'll try this forum for a few weeks to see how it goes!
I used nibabel to load it fine but it’s a 3D and I threshold it using threshold_otsu
The error I’m getting is “Nifti1Image’ object has no attribute min
Nifti1Imageobject. There is probably a function you can call on it that will give you a numpy array? Sorry, I don’t know that library.
nibabelwhich looks pretty tailored to your needs?