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{'Category': u'da1107d98a0e455da8648cb92c33aabf', 'ReferenceAnalysesGroupID': u'QC-007-001', 'LowerDetectionLimitSoil': u'2.5', 'Uncertainties': [], '_signature': '\xa1\x83\xcb\x0c\x01\xc0\t\xfd\xd1V\xf8\xab\xfdYP\x06', 'SortKey': None, 'marshall_hook': None, 'RetractedAnalysesPdfReport': <plone.app.blob.field.BlobWrapper object at 0x7f7b485497d0>, 'Attachment': [], 'Department': u'371de92094ac41e1b904c48b0f80647c', 'DuplicateVariation': (0, 0), '_senaite_core__Field__Edit_Analysis_Hidden_Permission': ('LabManager', 'Manager', 'LabClerk', 'Publisher'), '_at_creation_flag': False, 'title': u'Sulfate', 'demarshall_hook': None, 'ProtocolID': u'EPA 9038', 'id': 'SA-100', 'Precision': 1, '__provides__': <zope.interface.Provides object at 0x7f7b4854b610>, 'SurrogateRawSpike': (0, 0), 'DilutionFactor': (1, 0), 'FinalAmount': (250, 0), '_EtagSupport__etag': 'ts65281572.92', 'SurrogateLimitsSoil': u'', 'Analyst': u'', 'UpperDetectionLimit': (1000000000, 0), 'Keyword': u'sulfate', 'NumberOfRequiredVerifications': 1, '__annotations__': <BTrees.OOBTree.OOBTree object at 0x7f7b48549a50>, 'portal_type': 'ReferenceAnalysis', 'Multiplier': (10, 0), '_at_uid': '613faa816ef441eeac9d9a675ca19ac0', 'ResultAnalysisDate': None, 'at_references': <Folder at at_references>, '_Modify_portal_content_Permission': (), 'DetectionLimitOperand': u'', 'VAT': (0, 0), 'PrecisionFromUncertainty': False, 'AnalysisService': u'87e212b493264fc297fecfaf88752596', 'InterimFields': [], 'InitAmount': (25, 0), 'ScientificName': False, 'RawResult': (18, 66), 'Unit': u'mg/L', 'RawQuantLimit': (5, 0), 'RetestOf': u'', 'ShortTitle': u'', 'BulkPrice': (0, 0), 'ExponentialFormatPrecision': 7, 'creation_date': DateTime('2019/02/11 17:47:18.397642 US/Central'), 'Instrument': u'1c500ae80fae431d8186d033e710f3fc', 'StringResult': False, 'SurrogateLimitsWater': u'', 'AnalysisFlag': u'', 'Hidden': False, 'PointOfCapture': u'lab', 'UpperDetectionLimitSoil': (1000000000, 0), '_senaite_core__Edit_Results_Permission': (), 'ResultCaptureDate': DateTime('2022/10/09 02:07:36.419525 UTC'), 'MaxTimeAllowed': {'hours': '0', 'minutes': '0', 'days': '5'}, 'modification_date': DateTime('2022/09/19 12:58:28.465855 GMT-5'), 'RawDetectionLimit': (2, 5000000), 'workflow_history': {'bika_referenceanalysis_workflow': ({'action': None, 'review_state': 'assigned', 'actor': 'jeffb', 'comments': '', 'time': DateTime('2022/10/09 02:04:40.461077 UTC')}, {'action': 'submit', 'review_state': 'to_be_verified', 'actor': 'jeffb', 'comments': '', 'time': DateTime('2022/10/09 02:07:36.423109 UTC')}, {'action': 'verify', 'review_state': 'verified', 'actor': 'jeffb', 'comments': '', 'time': DateTime('2022/10/09 02:12:52.777264 UTC')})}, 'ResultOptions': [], 'Method': u'b67a778abde54d9dbd414a38f68af7d9', 'RawDetectionLimitSoil': (2, 5000000), 'Remarks': <BaseUnit at Remarks>, 'CommercialID': u'', '_senaite_core__Field__Edit_Analysis_Result_Permission': (), 'AllowManualDetectionLimit': False, 'AttachmentOption': u'p', 'ResultsRange': {}, 'Accredited': False, 'Surrogate': False, 'Uncertainty': None, '_senaite_core__View_Results_Permission': ('Analyst', 'LabClerk', 'LabManager', 'Manager', 'RegulatoryInspector'), 'Price': (35, 0), 'ReferenceType': u'c', 'LowerDetectionLimit': u'25', 'SoilUnit': u'ppm', 'InstrumentEntryOfResults': True, 'ManualEntryOfResults': True, 'DetectionLimitSelector': False, 'AdjustResult': u'True', '_senaite_core__Field__Edit_Analysis_Remarks_Permission': (), 'Result': u'187', '_md': {'effectiveDate': None, 'language': u'en', 'rights': <BaseUnit at rights>, 'subject': (), 'location': u'', 'expirationDate': None, 'contributors': (), 'allowDiscussion': None, 'creators': (u'admin',), 'description': <BaseUnit at description>}, '__ac_local_roles__': {'jeffb': ['Owner']}, 'AllowManualUncertainty': False, 'SelfVerification': -1}
hello，everyone！I install senaite on unbuntu18.04, refer to the documentation https://www.senaite.com/docs/installation .``` (base) senaite@senaite-OptiPlex-7060:~/senaitelims$ PYTHONHTTPSVERIFY=0
buildoutInstalling instance.
While:
Installing instance.
An internal error occurred due to a bug in either zc.buildout or in a
recipe being used:
Traceback (most recent call last):
File "/home/senaite/miniconda2/lib/python2.7/site-packages/zc/buildout/buildout.py", line 2174, in main
getattr(buildout, command)(args)
File "/home/senaite/miniconda2/lib/python2.7/site-packages/zc/buildout/buildout.py", line 817, in install
installed_files = self[part]._call(recipe.install)
File "/home/senaite/miniconda2/lib/python2.7/site-packages/zc/buildout/buildout.py", line 1603, in _call
return f()
File "/home/senaite/buildout-cache/eggs/plone.recipe.zope2instance-4.4.1-py2.7.egg/plone/recipe/zope2instance/init.py", line 169, in install
installed.extend(self.install_scripts())
File "/home/senaite/buildout-cache/eggs/plone.recipe.zope2instance-4.4.1-py2.7.egg/plone/recipe/zope2instance/init.py", line 668, in install_scripts
requirements, ws = self.egg.working_set(['plone.recipe.zope2instance'])
File "/home/senaite/buildout-cache/eggs/zc.recipe.egg-1.3.2-py2.7.egg/zc/recipe/egg/egg.py", line 101, in working_set
**kw)
File "/home/senaite/miniconda2/lib/python2.7/site-packages/zc/buildout/easy_install.py", line 957, in install
return installer.install(specs, working_set)
File "/home/senaite/miniconda2/lib/python2.7/site-packages/zc/buildout/easy_install.py", line 674, in install
for spec in specs]
File "/home/senaite/miniconda2/lib/python2.7/site-packages/pkg_resources/init.py", line 2995, in parse
req, = parse_requirements(s)
File "/home/senaite/miniconda2/lib/python2.7/site-packages/pkg_resources/init.py", line 2942, in parse_requirements
yield Requirement(line)
File "/home/senaite/miniconda2/lib/python2.7/site-packages/pkg_resources/init.py", line 2951, in init
raise RequirementParseError(str(e))
RequirementParseError: Invalid requirement, parse error at "'='"
```
Getting error when importing the senaite setup load
Error Traceback (most recent call last): File "/home/senaite/senaitelims/src/senaite.core/src/senaite/core/browser/form/adapters/data_import.py", line 43, in handle_data_import LoadSetupData(self.context, self.request)() File "/home/senaite/senaitelims/src/senaite.core/src/senaite/core/exportimport/load_setup_data.py", line 119, in call adapter(self, workbook, self.dataset_project, self.dataset_name) File "/home/senaite/senaitelims/src/senaite.core/src/senaite/core/exportimport/setupdata/init.py", line 115, in call self.Import() File "/home/senaite/senaitelims/src/senaite.core/src/senaite/core/exportimport/setupdata/init.py", line 546, in Import raise Exception(message) Exception: Client %s has no NameCan any help with this error? the clients' sheet has a Name column.
_
@crazy_babaq_twitter Here is an UNOFFICIAL document I put together for everyone struggling to figure out how to install senaite for the first time with no knowledge of LINUX or cloud or anything. Hope it helps:
An Easy, Beginner's Guide, .Step-by-Step Senaite Cloud Install with Digital Ocean and Docker
How do you reload Senaite when developing?
Currently to implement changes I am restarting my Docker container. I would like to be able to hot reload to implement code changes. Failing that It would be great to reload Senaite via the browser, similar to the process described for plone.reload (https://github.com/plone/plone.reload).
Thank you.
As background to my question:
In clinical laboratories, the move towards automated random access analysers has shifted the focus to working with a single sample (belonging to a patient), rather than necessarily worksheets which has different patients on them. The sample is processed as a “worksheet” in itself as all analyses on that sample needs to be done as soon as possible. This can be done well in senaite with just omitting the assigning of a sample to a worksheet.
The samples for a single patient can be done by a range of different doctors (clients in Senaite’s case). The results of the patient should be grouped, and not necessarily only grouped in the “Clients” view tab – as patients move from clinicians quite often. Can this results view be setup somehow, either on a Senaite.listing interface or on the COA via senaite.impress? One needs to be able to see the “Patient’s” previous result on the COA.
Any help in this regard will be highly appreciated.
1 reply
(base) senaite@senaite-OptiPlex-7060:~/Plone-5.2.9-UnifiedInstaller$ ./install.sh standalone --target=/home/senaite --instance=senaitelims --password=admin --with-python=/home/senaite/miniconda2/envs/senaite/bin/python2.7
Testing /home/senaite/miniconda2/envs/senaite/bin/python2.7 for Zope/Plone requirements....
/home/senaite/miniconda2/envs/senaite/bin/python2.7 looks OK. We will use it.
Rootless install method chosen. Will install for use by system user senaite
Detailed installation log being written to /home/senaite/Plone-5.2.9-UnifiedInstaller/install.log
Installing Plone 5.2.9 at /home/senaite
Creating Python virtual environment.
New python executable in /home/senaite/senaitelims/bin/python2.7
Also creating executable in /home/senaite/senaitelims/bin/python
Installing setuptools, pip, wheel...
done.
Installing Python requirements in virtual environment.
Unable to install Python requirements in virtual environment.
Installation has failed.
See the detailed installation log at /home/senaite/Plone-5.2.9-UnifiedInstaller/install.log
to determine the cause.Creating Python virtual environment.
Virtualenv successfully created
Installing Python requirements in virtual environment.
DEPRECATION: Python 2.7 reached the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 is no longer maintained. pip 21.0 will drop support for Python 2.7 in January 2021. More details about Python 2 support in pip can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support pip 21.0 will remove support for this functionality.
WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', error(0, 'Error'))': /release/5.2.9/requirements.txt
WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', error(0, 'Error'))': /release/5.2.9/requirements.txt
WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', error(0, 'Error'))': /release/5.2.9/requirements.txt
WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', error(0, 'Error'))': /release/5.2.9/requirements.txt
WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', error(0, 'Error'))': /release/5.2.9/requirements.txt
ERROR: Could not install packages due to an EnvironmentError: HTTPSConnectionPool(host='dist.plone.org', port=443): Max retries exceeded with url: /release/5.2.9/requirements.txt (Caused by ProxyError('Cannot connect to proxy.', error(0, 'Error')))
Unable to install Python requirements in virtual environment.
Greetings to all. I'd like to add the analyst signature to the published report. i tried the following and it isn't working. any pointers are well appreciated on moving this forward. thanks again.
<tal:analysts repeat="analyst python:model.getAnalysts()">
<td style="border:none">
<div>
<img tal:condition="analysts/Signature|nothing"
tal:attributes="src string:${analysts/absolute_url}/Signature" style="height:35px"/>
</div>
<div class="font-weight-bold">
<span tal:content="analysts/Salutation|nothing"></span>
<span tal:condition="analysts/Salutation|nothing"> </span>
<span tal:content="analysts/Fullname|nothing"></span>
</div>
<div>
<span tal:content="analysts/JobTitle|nothing"></span>
</div>
<div>
<span tal:content="analysts/DefaultDepartment/title|nothing"></span>
</div>
</td>
</tal:analysts>
Is there a way to prevent the duplication of Batch objects into the same UID when they are created?
In our laboratory's case, a Batch is created for every request. A request would sometimes contain more than one sample. The certificate to publish would always contain all of the samples in the request. This is the reason why a new batch is always created per request.
No errors are reported while the Batch is created, and the analyses are performed, submitted and verified. However, when the users try to publish a certificate, this error sometimes appears:
https://i.imgur.com/5sznezE.png
It happens about once a month, as reported by the users. Is there a way to prevent it from happening?
Hello everyone,
It seems that for a while now there is no history awareness / versioning on ASs? So once an AS keyword has been used, it cannot be edited, https://mysite.com/bika_setup/bika_analysisservices/analysisservice-12, and a message, ‘Keyword is used in active analyses and can not be changed anymore’ is displayed
I have a case now where an instrument will be used to capture some results which were done manually before with arbitrary keyword , e.g. ControllerConductivity. In the instrument’s import file conductivity_from_controller is used and i want to edit the AS Keyword to match
Would that be possible at all under any circumstances? Say once all the Sample using the analysis are cancelled or published.
Only way out seems that i have to deactivate these and create new ASs with the correct keywords ( but then all of Profiles, Calculations, Reference Definitions, Specifications and Worksheet Templates are affected and the AS have to be replaced there too
I would love to add any of you to the hashnode team publication in case you is interested in contributing to the community through blog articles.
Can I use Senaite for managing MultiLabs org
Do you mean as a hosted service for different labs or the same lab with different locations? Please provide a clear use case
Humble greetings and happy new year everyone,
I would like to ask if this is a bug or not. We had an IDServer for a worksheet set like this WS{year}-{seq} and on the new year it did not reset the sequence and continued like this WS22-007, WS22-008, WS23-009 instead of WS23-001, the WS23-009 should be WS23-001?