@bgruening:matrix.org The report has ben sent for the job/item "Transcript maps" but the error also occured on "Assembled Transcripts" job/item since the both items were created after running the Trinity tool. Let me know if you need the bug report for the "Assembled Transcripts" item to be sent as well.
The scrolling in the history does not work in the beta update but works in the legacy history panel so I've switched back for now. Thanks.
Hi there. My data upload job doesn't run. How can I fix this problem?
Are we experiencing downtime now? How long does it take?
Thank you and waiting for your feedback.
Hi, any idea how long will the current down time be for?
@bgruening:matrix.org any update on my bug report for Trinity?
Yvan Le Bras
Hi @LadushkaY_twitter . I see you encounter issues with RNAseq analysis. You mentionned 4 weeks of running jobs? Seems to be quite big... Do you think this is "normal" (ie, you have big input files ?) or maybe not and maybe "just" trying rerunning the jobs can be ok ? If you have big files, maybe it can be of interest to look at reducing it but not sure this is relevant / possible
You want to have reads in FASTA format? I don't think they store it that way. But you can convert fastq to fasta.
I tired to convert from Fastq to Fasta. however, the result is not matching with Mirdeep ( I'm trying to follow galaxy tutorial for miRNA analysis). SRA does provide an option to directly download in Fasta, but I can't find an option here, unfortunately.
@bgruening:matrix.org Hi Björn, I get an "Internal Server Error" when trying to export a history into a workflow. Any insides? I would like to export all tools and settings to the workflow to publish it alongside a Revised Manuscript.