You want to have reads in FASTA format? I don't think they store it that way. But you can convert fastq to fasta.
I tired to convert from Fastq to Fasta. however, the result is not matching with Mirdeep ( I'm trying to follow galaxy tutorial for miRNA analysis). SRA does provide an option to directly download in Fasta, but I can't find an option here, unfortunately.
@bgruening:matrix.org Hi Björn, I get an "Internal Server Error" when trying to export a history into a workflow. Any insides? I would like to export all tools and settings to the workflow to publish it alongside a Revised Manuscript.
I have a collection of many samples that I ran fastp on (on .eu) - some jobs failed with the cryptic error message "Unable to finish job" and nothing in stderr. What is the easiest way to select all the failed datasets and re-run them to see if they succeed a second time?
I'm trying to help out a colleague who is doing Galaxy 101 but one of their jobs failed with the message "Unable to finish job". This is history ID 0876ff39fabc4ccd - is there something wrong with the server?
I just tried re-running the job and got a new error - "cat: write error: Broken pipe" - this is an error reported in the stderr (whereas the previous one had empty stderr) but again it looks strange to me