Jobs in gray might be normal depending on how many users are running jobs currently. However in your case I think transfs is a GPU tool, so here it will take even longer ... we do not have that many GPUs
Sorry I keep asking. I get this error when running MSCONVERT. What can I do? ln: failed to create symbolic link 'qExactive01819.raw': Permission denied
bgruening - I need to share a history with you - this is the one where when I select multiple datasets it does not give me the option to build a collection. Please DM me the correct email to share with.
btw I tried to get an "overview" of this history using parsec but parsec -g usegalaxyeu datasets get_datasets --history_id 46051bf8534e30b9 gives me an empty list
Hello I used Import Annadata and loom to process my single cell data My genes file included 28 thousand gene symbols and ensemble IDs Now, although the output of this tool is green, the number of genes is considered zero And in the matrix he created, my genes are not there what is the reason?
hahaha thank you for reminding me that I should write that tool (there is a checksum tool in the toolshed but it does sha256, not md5). I actually need a tool to do md5 and as far as I know it is not possible in Galaxy at the moment.
Hi all, is it possible to create a collection of uploaded files within a workflow (which tool if there is one)? Is the "Apply rules" tool functional as a workflow tool? I want to build a workflow for uploaded paired-end RNAseq data and automate the rule-based generation of a paired collection.
But I realise that there is a blue field above the list of icons
So it is a small design change with the visualisation button leading to the "Visualize" menu but with a blue bar at the top with the links which used to be on the datasets. So it is me not used to design changes :P